Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02239 ATGGCATCAATGGCGTCgtctttatataatttagcTCCAATTTCATCCTCTAGCACCAAAATTTTCTCCAGTTTCCCATCTTCTCCTATCATCAGGCTTTCTCATAGCCTTACACCCGTCTTTACAAAATCAAGACCCATCTTTTAccgaaagaaaaggaataccGAATTTTCCGTCAAAGCACAAACCCTAGACTTCTCGGATTCCTTCTTTGAAGATGGATTCGGGTCGGGCGACGACCCTACTTCTCCGGGATCGGGGTTTACAGCCGTGGAGGAGAAGGAGGAACCACAATGCCCTCCCGGACTGAGACACTACGAGACAATGGCGGTTCTAAGGCCTGACATGTCCGAGGATGAGCGACTCGCACTGACGCAGAGATACGAGGagCTGCTCGTTGCTGGAGGTGGCATGTATGTAGAGGTTTATAACAGAGGAGTTATCCCACTAGCATATAGcatcaagaagaaaaacaaggctGGGGAGACCAACAATTACTTGGATGGCATCTACCTCCTATTCACCTACTTTACGAAGCCCGAGTCCATGGACATTCTCGAGAAGACACTAAAAGCTGATGACGATGTCATCCGATCAATGAATTCCAAGGTTAGGAAACGCAaatatta 629 0.4324 MASMASSLYNLAPISSSSTKIFSSFPSSPIIRLSHSLTPVFTKSRPIFYRKKRNTEFSVKAQTLDFSDSFFEDGFGSGDDPTSPGSGFTAVEEKEEPQCPPGLRHYETMAVLRPDMSEDERLALTQRYEELLVAGGGMYVEVYNRGVIPLAYSIKKKNKAGETNNYLDGIYLLFTYFTKPESMDILEKTLKADDDVIRSMNSKVRKRKY 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02239 209 SUPERFAMILY Ribosomal protein S6 103 207 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bva11g02239 209 Pfam Ribosomal protein S6 105 201 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bva11g02239 209 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 6 209 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bva11g02239 209 CDD bS6_chloro_cyano 103 204 - -
Bva11g02239 209 MobiDBLite consensus disorder prediction 77 98 - -
Bva11g02239 209 PANTHER 30S RIBOSOMAL PROTEIN S6 ALPHA, CHLOROPLASTIC 6 209 - -
Bva11g02239 209 TIGRFAM S6: ribosomal protein bS6 104 201 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bva11g02239 209 Gene3D - 102 209 IPR014717 -
Bva11g02239 209 Hamap 30S ribosomal protein S6 [rpsF]. 103 206 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02239 Bva-Chr11 18091467 18093701 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02239 K02990 - gmx:100305490 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02239 11 18091467 18093701 Bva11g02239 11 18091467 18093701 ECH