Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02232 ATGAAGACTCAACATCAACATGCCTTCTTGAACATCAAATGTCAGAGCAACTATCCTCAGAAAAAGGACAACAACAACAAGAGGAGCTTCTACGAGCTCTCCCTCTCCTTGATCTTTTCCCTATGGTGCCTCCTATTCTTATTCTATTCTAAGCTTGGCCTTGGTCACGGAAATGGAGAGATTAATGCGTCGTCGAGCTCCATCAGTTCCAGAGGTCTTAGCCAGAAAGTTGCAAAACCCATGTACTCCCATGCTGATACAAGTAGATTAGAACAAGTATTTTGGAAAGTTTTAGGTAACACTCACTTAGTGTGTGAATTGAAGGcggaagaagagaagaaacttGAAGCCGTACAAGTTCCATATGAGAAAGATCATCACACTCATGATCTGAATTATGAGGAACTACGAAACATAACAACGCAAGAAGAAAGTCAGGGAATAAAGTCTCAGCTCGTTAACATCACTCGCCGGCTTGAACCTGATGGATCAGAGTATAACTACGCTTCTGAATCTAAAGGTGCAAAGGTGGTCGCTCATAATAAGGAAGCAAAAGGGGCAAGTAATATTCTAGGGAAGGACCATGACAAGTACCTGAGAAACCCATGTTCTGTGGGAGGAAAGTTTGTTGTTATCGAGCTTGCAGAAGAGACTCTGGTTGATTCTGTGAAAATAGCCAACTTCGAGCATTATTCTTCTAATTTCAAGGACTTTGAATTGTCTAGCAGTTTGACTTACCCAACTGAAACGTGGAGTCCTCTGGGACACTGTCATGCTGCTAATGTTAAGCATGCGCAGATCTTTAAGCTGCCTGAACCCAAATGGGCGAGGTATTTGAATTTGAGCTTACTCAGTCATTATGGATCAGAGTTTTACTGCACATTGAGTGTTGTTGAAGTTTATGGGATCAATGCCATAGAGCGGATGCTTGAGGATCTAATTGTTGCTTCTGTGGGAGTGGGATCTATTCCTAACAAACTGACAGAGTCTAACTCCAGTGACATTCCTTCTTTGAAGCCAGAAATTGACAGGAATGTGAAACAAGTTGAGAGTAGGAATGACAGTGCGGCTGCTGAGACACCAAATAATGATGTGGCTCAAAAGATTGAGATGGAAGGGACAAAGAATCCAGTGATTGTCAACAAGGTTCCTGATCCTGTAATGGAATTTAGACAACAGCTTAATGGCAGGGTAGCCGGTGACACTGTTCTCAAGATTTTGATGCAGAAGGTAATGTCAGTGGAGCTGAACTTGTCTGCCCTTGAGGAGTACCTCAAAGAAATGAACAGGAGACAAGGGGACATAATACCAGATCTGGAGAAAGAGCTCTCCAGAATATCACAAAGCCTAGAGCAAAGCAAGACAGAGATCGATGGTCTCTTGCATTGGAACACAATTACGGAAAAAGGAATAAGTGAACTTGAGTTATGGAAAGATGCTGTATCATCTCAAGTTGATGCATTGgtcaaagaaaatagagtGCTAAGatTAGATGTTCAAAATATTAGAAGTGATCAAGTCAAGCTGCAAAGCAAAGAGCTTGCTGTGCTGGTTGTGAGCCTTTTGTTTGTATGCCTTGCAGTTTTCAAGCTAATTTGGGTACACATACTGACCTTTTTCGGAGCATACAATTCTGAAAAGGCACGCCAGACAATTAGAGGTTTGGTAACATTATTTGTATGCTGCTGTTTAACAATAATGATTGTCATGTTCTATAGCTA 1721 0.4079 MKTQHQHAFLNIKCQSNYPQKKDNNNKRSFYELSLSLIFSLWCLLFLFYSKLGLGHGNGEINASSSSISSRGLSQKVAKPMYSHADTSRLEQVFWKVLGNTHLVCELKAEEEKKLEAVQVPYEKDHHTHDLNYEELRNITTQEESQGIKSQLVNITRRLEPDGSEYNYASESKGAKVVAHNKEAKGASNILGKDHDKYLRNPCSVGGKFVVIELAEETLVDSVKIANFEHYSSNFKDFELSSSLTYPTETWSPLGHCHAANVKHAQIFKLPEPKWARYLNLSLLSHYGSEFYCTLSVVEVYGINAIERMLEDLIVASVGVGSIPNKLTESNSSDIPSLKPEIDRNVKQVESRNDSAAAETPNNDVAQKIEMEGTKNPVIVNKVPDPVMEFRQQLNGRVAGDTVLKILMQKVMSVELNLSALEEYLKEMNRRQGDIIPDLEKELSRISQSLEQSKTEIDGLLHWNTITEKGISELELWKDAVSSQVDALVKENRVLRLDVQNIRSDQVKLQSKELAVLVVSLLFVCLAVFKLIWVHILTFFGAYNSEKARQTIRGLVTLFVCCCLTIMIVMFYS 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02232 573 Coils Coil 411 431 - -
Bva11g02232 573 ProSiteProfiles SUN domain profile. 145 305 IPR012919 -
Bva11g02232 573 PANTHER SUN DOMAIN-CONTAINING PROTEIN 5 61 572 - -
Bva11g02232 573 PANTHER SUN DOMAIN-CONTAINING PROTEIN 5 19 65 - -
Bva11g02232 573 Coils Coil 436 456 - -
Bva11g02232 573 Gene3D - 170 313 - -
Bva11g02232 573 PANTHER MEMBRANE PROTEIN CH1 RELATED 19 65 IPR045120 GO:0016020
Bva11g02232 573 PANTHER MEMBRANE PROTEIN CH1 RELATED 61 572 IPR045120 GO:0016020
Bva11g02232 573 Pfam Sad1 / UNC-like C-terminal 180 302 IPR012919 -
Bva11g02232 573 SUPERFAMILY Galactose-binding domain-like 204 301 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02232 Bva-Chr11 18063961 18066361 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02232 - - gmx:102668828 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02232 11 18063961 18066361 Bva11g02232 11 18063961 18066361 ECH