Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02226 atgGTGACCAAGACCGTTCTCGTCACAGGTGGTGCCGGTTACATTGGCAGCCATACCGTTCTCCAACTCCTTCTTGGCGGTTTCAAAGCCGTCGTCGTAGACAACCTTGATAATTCTTCTGAAATTGCTATCCACAGAGTCAAAGAGCTCGCTGGCGAGTTCGGCAATAATCTTTCCTTCCATAAGGTAGACCTCAGGGACAGACCTGCACTTGAGCAAGTTTTCTCTACGACTCAATTCGATGCTGTCATACATTTTGCTGGATTGAAAGCAGTTGGTGAAAGCGTACAGAAACCGTTACTTTACTACAACAACAACTTGATCGGGACTATAACGCTGTTGGAAGTCATGGCTGCTCATGGATGCAAGAAGTTTGTGTTCTCATCTTCAGCCACTGTATATGGTTGGCCAAAGGAGGTTCCTTGCACAGAAGAGTTTCCACTCTCAGCAATGAACCCATATGGGCGAACCAAGTTATTCATTGAAGAAATCTGTCGTGATATCTACCGCGCAGACTCAGAATGGAAGATAATGTTGTTGAGATATTTCAACCCAGTTGGTGCACATTCTAGTGGTCATATTGGTGAGGATCCTTGTGGAATTCCAAACAATCTCATGCCATTTGTTCAGCAAGTAGCAGTTGGCAGACGCCCTGCACTGACAGTTTTTGGAAATGATTATAATACAATTGATGGTACTGGGGTCCGTGATTATATTCATGTCGTTGATTTAGCAGATGGGCACATTGCTGCATTGTGTAAGCTAGATGATTCTAATATAGGTTGTGAGGTATACAACTTGGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTAAAAGCTTTTGAAAAGGCATCTGGAAAGAAAATTCCACTTGTGATGGCTGATCGGCGACCTGGTGATGCTGAAATTGTTTATGCATCAACAGAGAAAGCAGAAAGGGAACTTAATTGGAAGGCAAAGTATGGCATTGATGAGATGTGCCGAGATCAATGGAATTGGGCTAGCAAAAATCCTTATGGCTATGGATCTCAGGACTCCACCAATTA 1049 0.4357 MVTKTVLVTGGAGYIGSHTVLQLLLGGFKAVVVDNLDNSSEIAIHRVKELAGEFGNNLSFHKVDLRDRPALEQVFSTTQFDAVIHFAGLKAVGESVQKPLLYYNNNLIGTITLLEVMAAHGCKKFVFSSSATVYGWPKEVPCTEEFPLSAMNPYGRTKLFIEEICRDIYRADSEWKIMLLRYFNPVGAHSSGHIGEDPCGIPNNLMPFVQQVAVGRRPALTVFGNDYNTIDGTGVRDYIHVVDLADGHIAALCKLDDSNIGCEVYNLGTGKGTSVLEMVKAFEKASGKKIPLVMADRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYGSQDSTN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02226 349 TIGRFAM galE: UDP-glucose 4-epimerase GalE 6 340 IPR005886 GO:0003978|GO:0006012
Bva11g02226 349 PANTHER UDP-GLUCOSE 4-EPIMERASE 1 346 - -
Bva11g02226 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 341 IPR036291 -
Bva11g02226 349 Gene3D - 6 275 - -
Bva11g02226 349 Gene3D - 194 335 - -
Bva11g02226 349 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Bva11g02226 349 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
Bva11g02226 349 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02226 Bva-Chr11 18029605 18033456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02226 5 319 Miscellaneous Gene Families AT4G00110 26.807 7.19e-21 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02226 K01784 - gmx:100792137 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02226 11 18029605 18033456 Bva11g02226 11 18029605 18033456 ECH