Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02206 ATGGCGGAACCTCCGAAAGGGGACCTTTTCAGTCGGGACCACCTTGATGAGGACGCCGGAGCTGCTTTCGTCCTCCAGTCAAAAGGTCAGTGGTGGCACGCGGGTTATCATCTAACGACGGCAATCGTTGGACCGACAATTCTGACGCTGCCGTTTGTATTCAGAGGCCTGGGATGGTGGCTGGGCTTATTCTGCTTAACGATGATGGGGATCGTCACCTTTTACTCTTACTACCTCATGTCCAAAGTGCTTGATCACTGTGAGAAATCGGGTCGCCGCCACATCCGTTTCCGAGAACTCGCCGCCGACGTCTTGGGCTCTGGATGGATGTactattttgtcatatttattCAAACGGCAATCAATTGCGGGATTGGAGTGGGATCGATTTTGCTTGCCGGAGAATCCCTTCAGATCATGTACTCCAATATTTCGCCCCATGGACCTCTAAAATTGTACCAGTTCATAGCAATGGCGACAGTGGTAATGATAGTTCTATCTCAGCTTCCAACCTTTCACTCACTGCGACATATCAACTTGTGTTCACTGTTCCTCTGTCTGGGATACACTATGCTGGTGGTTGGCGCTTGCATTCATGCTGGCTTGTCAGAAAATGCCCATTCAGCGGACTATTCCTTAGAATCTCACAAGTCCGCAAGGGTTTTCAGTGCCTTCACTTCCATCTCCATTATTGCAGCAATATTCGGGAATGGGATACTACCTGAGATACAGGCGACTCTAGCACCACCTGCCACTGGGAAGATGGTAAAAGGTCTTATTATGTGCTATGCTGTGATTTTCGTGACTTTCTACTCTGCTGCTGTATCTGGATATTGGGTGTTTGGAAACAAGTCCAGCTCCAACATTCTTAATAGTCTAATGCCAGATAATGAGCCTGCTTTGGCTCCAACATGGGTATTAGCCCTTGCAATCATCTTTGTTCTTCTTCAGCTCTTTGCCATTGGCCTGGTATATTCTCAAGTAGCTTATGAGATAATGGAGAAGAAATCAGCTGATACGAAGCAGGGGATGTTTTCCAAACGAAACCTTATTCCTCGCATTATTCTACGGACAATTTACATGATATGCTGTGGGTTTGTGGCATCTATGTTGCCATTTTTCGGGGACATCAATGCTGTAGTTGGTGCTATTGGTTTCATCCCTCTGGATTTCGTTCTCCCCATGATACTTTACAACATGACATACAAGCCTCCAAAATCATCCCTCACTTTTTGGATCAACAACACAATTATGATCACCTTCACTGGTGCAGGAATCATGGGTGCATTCTCTTCTATAAGAAAATTGGTTCTCGATGCCAACCAATTTAAGCTCTTTGATAGTAAAGTTGTTGACTA 1358 0.4536 MAEPPKGDLFSRDHLDEDAGAAFVLQSKGQWWHAGYHLTTAIVGPTILTLPFVFRGLGWWLGLFCLTMMGIVTFYSYYLMSKVLDHCEKSGRRHIRFRELAADVLGSGWMYYFVIFIQTAINCGIGVGSILLAGESLQIMYSNISPHGPLKLYQFIAMATVVMIVLSQLPTFHSLRHINLCSLFLCLGYTMLVVGACIHAGLSENAHSADYSLESHKSARVFSAFTSISIIAAIFGNGILPEIQATLAPPATGKMVKGLIMCYAVIFVTFYSAAVSGYWVFGNKSSSNILNSLMPDNEPALAPTWVLALAIIFVLLQLFAIGLVYSQVAYEIMEKKSADTKQGMFSKRNLIPRIILRTIYMICCGFVASMLPFFGDINAVVGAIGFIPLDFVLPMILYNMTYKPPKSSLTFWINNTIMITFTGAGIMGAFSSIRKLVLDANQFKLFDSKVVD 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02206 452 PANTHER OS05G0424000 PROTEIN-RELATED 2 446 - -
Bva11g02206 452 Pfam Transmembrane amino acid transporter protein 28 436 IPR013057 -
Bva11g02206 452 PANTHER GABA TRANSPORTER 2 ISOFORM X1-RELATED 2 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02206 Bva-Chr11 17930888 17934869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02206 1 452 Organic Solute Cotransporters AT5G41800 78.540 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02206 - - gmx:100815232 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02206 11 17930888 17934869 Bva11g02206 11 17930888 17934869 ECH