Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02203 ATGGTGAAGCATCGGTTGAGAGAGtctataaaatctttttttagcAGTCACATTGATCCTGAAAAAGAAGAGCAGCTGCAGGGAGCTAAAACAGATATTGAAGACAAAGTAAAAAGGATATTGAAGCTTATTAGAGAAGAAAATCTTGAAGAGGATGGTAATGCGGTGGAACTTTCTAAGAAGGAACCACTTGTTGAACTGATTGAGGATTTCCACAATCAGTATCAATCCCTCTATGAACGATACGACCATCTTACAGGAGAGCTGAGGAAAAAGATTAATGGCAAACGAGAGAAAGATAGTTCTTCATCTAGCTCAGACTCAGATTCAGATTACTCTTCCAAGAAGAGAGACAGTAAAAATGGACAACTGGAAAGTGAACCTCAACAGATACTTGATGGCGTAAAGCTAGAACTTGAGAAGGCACAGATGGAAGTTGCAGAATTAAATCATAAGTTGACTATTACTTGTGACGAGAAGGAGGATCTGAATTCAAAATATCTAGCAGCGCTGAGCAAAATACAAGAAGCAGACAAAATCTTCATGGATTTGAAAATTGATGCTGAAGCAGTGGGCATTCAAAGATCCAAACTTTTAGTTGAGAATGGTGAACTAAAGAAGCAACTTGATATTTCTGGTGAGATGGAAGCTGAACTGAACCAAAGGCTGGAAGAATTGAAGATAGAGAAAGATAGTTTGACCACGGAGAAAGAGGCGTTTTACAAACAGATTGAAGAGGAACAGAAGATCACAAACAGCCTGAGAACGATGGTTGATCAACTGAAAGAGGAGAAATCAGACCTTGGGAAAGAATTAGGAGTTGTTACAGGGGAACTTTCCCTTCTGAATCAAAGATTGGAAGACCTGAAGAGGGAGAATGATGATTTGACCGAGAAAAAAGAGACAGCCTTTAGGCAGATTGACGAGGAACAGAAGATTACGAGCAGCCTGAGAATGATTGTAGACCAAATGAAAGAGGAGAAATTAGACCTTGGAAAAGAATTGGAAGCCGTAAAAGGGGAGCTTTCCACTCTGAATCAAAGATTGGAAGACTTGAAGACAGAGAAAGATAATTTGAGCATGGAGAAAGAGACAGCTTTCAGACAGATTGAGGAGGAACAGAAGAATACAAACAGCCTGAGAACGATGGTTGATCAACTGAAAGAGGAGAAATCAGACCTTGGGAAAGAATTAGGAGTTGCTACAGGGGAACTTTCCCTTCTGAATCAAAGATTGGAAGACCTGAAGAGGGAGAATGATGATTTGACCGAGAAAAAAGAGACAGCCTTTAGGCAGATTGACGAGGAACAGAAGATTACGAGCAGCCTGAGAATGATTGTAGACCAAATGAAAGAGGAGAAATTAGACCTTGGAAAAGAATTGGAAGCCGTAAAAGGGGAGCTTTCCACTCTGAATCAAAGATTGGAAGACTTGAAGACAGAGAAAGATAATTTGAGCATGGAGAAAGAGACAGCTTTCAGACAGATTGAGGAGGAACAGAAGAATACTAACGGCCTGAGAGTGGTGGTTGATCAACTGCAAGATGATACATCAGAACTTGGGAAAGAATTGGAAGCTCTTACAAGGGAACTTTCCGCTATGAATCAAAGATTGGAAGACTTGAATACAGAGAAAGATAGTTTGATCATAGAGAAAGAGACAGCTTTCAGACAGATTGACGAGGAACAGAAGATTACAAACAGCCTGAGAGCGGTGGTTGATCAactgaaagaagagaaatcagaccttgagaaaaaattagaaactgTAACAGGGGAGTTTTCCATTCTGAGGGAGAAGCTTGAACATGCAGAGCACCAAGTCACAAATATAAGCCACACATTGAAAGCAACTGAGGAAGAGAATGAATCTGTCAAGTTGGAACTTTCACAGGTTTCAAATAAGGTTCAGGTGGCTCATCGCAGAGCAGAGGAACTAGTGGCTGAATTGAGTCAGTTAAAGGAGAAATTGgatgagagagaaagggagatTTCAACCCTCACTCAGATGCATGAGGAGTATGAGAATGAATCCTCAAATCGCATCAGGGCATTAGAGGCACAGCTTGCGAATTTGGAGGTCGAATTAGAATCCTCGCATACCCAGAAAAGAGACATAGAAGTGCAAATTACGAATAGCACAACAGAAGCAAGAGAACTGAGAGAACACAAGTTAGGGCTACAAAACCAAATTACAGAGCTAGAAGTGAAGttcaaagaaagagaacacGAACTATCTGCTCTCATGAAGAAACTTGAAGATAATGAGAACGAGTCTTCGTCTAAAATAGCAAACTTGACATCTCAGATGAACAATTTACAAACCGATATTGACACGTTACACGCTCAGAAAGATGAACTAGACGAACAAATGATTCGTAAAAGTAATGAAGCATCAACTCAAGTCAAAAGCATTACGGATCAGGTCAATGTATTGCAGCAGGAGGTGGAGATTCTACAACGCCAGAAATCTGACTTGGAAGTTCAACTTGAGAAAAAGACCCAAGAAATATCAGAGTATATGATGCAGATACAAAATCTGAAAGAGGAGGTCACAAACAAAACTCTGGATCAACGGAGATATGCGAAAGATAATGAATATTTAGCCATGCAGATAAGGAATCTGGGAATAGAGGTGAACTCAGTTACGAGCCAAAAGAgtgaaattgaagagaaaatacGGGCTAGCGACCTTGAGATGAATCAGCTGAGGGAGGAGAAGTTGTTGCTGCAAGATAAAATAATCGAATTGGAGAAAAGATCAGCAGAGAGAGAGTCCGAGTTCTTGGTTCTGCAGGACAAAATTACTACATTGGAGAACACATTAGGAGAGAAAGAGGTTGAGCTCTCTGCGCTGCAGAGTAAACTTAATGAAGAAAAGGACGAGACTTCAGCTCAAATAATGGCATTCACAGCTCAAGTTAATAATTTACAAACAGACCTCCTTGCATtgcagaaagagaaagaagacttGGTGCTGCATTGTGAAAGAGTTACAGAAGAGCACAGAGAAAGAATGACCATGGTAGAGAAAGAATTAGCAAGCAATACCACGGATCATAAAAGAATGCAGGAGGAACGGGAAGATGCATATCAGAAGTTAAGTACAGAGTACAAACAAATTCAGAGTCTGTCTCAGGAATGCCAGGTGAAACTCGAAgttgcagaaaagaaaattgaagaattgaCAGAAGAGTTCCATAAGGGCATTGAATCAAAAGATGAGATAATAGTTGAATTGGAAGAAACAGCAGAAAACCTGAAAAGAGACTTAGAGGTGAAAGGAGATGAAATCAGTACTTCGCTTGAGAATGTCCGCATGCTTGAAGTTAAGCTTCGCTTGTCGAACCAGAAGCTTCGGGTCACAGAACAATTGCTCAGTGAGAATGAAGAGAGCTTTAGAAATGCAGAACAGAAGCTCCTGCAGGATCAAAGAGCGCTTGAAGACAGGATTGCCACTTTGTTAGAAATAATTGCTGCTAATAATAAAGCTTTTCAGGAAGTGACTACTAGTATCAAAGAGAGCATGAGTTATGTGATGACTGGCATGGAGACCGTGGACTCAAAATTTGCTGacgaatataaaaattatgagaattatatttcaaacatCGCACATGAACTTAAGATTTTAAAGAACCGGATCAGAGagatgaataaagaaaaagagcagTTGAAGAATGACAGAGATCATTTGGAAGAGCAGCTGCagagtagaaacgaagaaaaattGGCTTTGAGGGAGATGATTCAGAAGCTAGAGGCTAAAGCGAGCAAAGAAGAATTAGAGAAGAACACGCTGACAACAACTGTACTTCAACTGAAGAAGACAGTTGGAGAGCtagagaaaatgatgaaagacaAAGATGATGTCGCTACGATTATCTCAAGGACATTCTCTCGAGGACTCGTGGTGGCCGGAGAACAACGAATCTGTGAAGGCCAAGCATTCTCAGCTTCACTATCAgtccaaaaattatacatGCTTCTTCAAGGAGGAAGAGGCTGCTGCATGAAGGACCTAGTTTCTGATCCTATGCCATTActgtattatttttcaattaaagcTGATATACCCCCATTTGAAATGGTTTTCATCTGTCATGACCACATACTTGGGGGATGGGTGGATCATAGTGAGGTTTCCTA 4148 0.3809 MVKHRLRESIKSFFSSHIDPEKEEQLQGAKTDIEDKVKRILKLIREENLEEDGNAVELSKKEPLVELIEDFHNQYQSLYERYDHLTGELRKKINGKREKDSSSSSSDSDSDYSSKKRDSKNGQLESEPQQILDGVKLELEKAQMEVAELNHKLTITCDEKEDLNSKYLAALSKIQEADKIFMDLKIDAEAVGIQRSKLLVENGELKKQLDISGEMEAELNQRLEELKIEKDSLTTEKEAFYKQIEEEQKITNSLRTMVDQLKEEKSDLGKELGVVTGELSLLNQRLEDLKRENDDLTEKKETAFRQIDEEQKITSSLRMIVDQMKEEKLDLGKELEAVKGELSTLNQRLEDLKTEKDNLSMEKETAFRQIEEEQKNTNSLRTMVDQLKEEKSDLGKELGVATGELSLLNQRLEDLKRENDDLTEKKETAFRQIDEEQKITSSLRMIVDQMKEEKLDLGKELEAVKGELSTLNQRLEDLKTEKDNLSMEKETAFRQIEEEQKNTNGLRVVVDQLQDDTSELGKELEALTRELSAMNQRLEDLNTEKDSLIIEKETAFRQIDEEQKITNSLRAVVDQLKEEKSDLEKKLETVTGEFSILREKLEHAEHQVTNISHTLKATEEENESVKLELSQVSNKVQVAHRRAEELVAELSQLKEKLDEREREISTLTQMHEEYENESSNRIRALEAQLANLEVELESSHTQKRDIEVQITNSTTEARELREHKLGLQNQITELEVKFKEREHELSALMKKLEDNENESSSKIANLTSQMNNLQTDIDTLHAQKDELDEQMIRKSNEASTQVKSITDQVNVLQQEVEILQRQKSDLEVQLEKKTQEISEYMMQIQNLKEEVTNKTLDQRRYAKDNEYLAMQIRNLGIEVNSVTSQKSEIEEKIRASDLEMNQLREEKLLLQDKIIELEKRSAERESEFLVLQDKITTLENTLGEKEVELSALQSKLNEEKDETSAQIMAFTAQVNNLQTDLLALQKEKEDLVLHCERVTEEHRERMTMVEKELASNTTDHKRMQEEREDAYQKLSTEYKQIQSLSQECQVKLEVAEKKIEELTEEFHKGIESKDEIIVELEETAENLKRDLEVKGDEISTSLENVRMLEVKLRLSNQKLRVTEQLLSENEESFRNAEQKLLQDQRALEDRIATLLEIIAANNKAFQEVTTSIKESMSYVMTGMETVDSKFADEYKNYENYISNIAHELKILKNRIREMNKEKEQLKNDRDHLEEQLQSRNEEKLALREMIQKLEAKASKEELEKNTLTTTVLQLKKTVGELEKMMKDKDDVATIISRTFSRGLVVAGEQRICEGQAFSASLSVQKLYMLLQGGRGCCMKDLVSDPMPLLYYFSIKADIPPFEMVFICHDHILGGWVDHSEVS 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02203 1382 Gene3D - 530 703 - -
Bva11g02203 1382 Coils Coil 1194 1270 - -
Bva11g02203 1382 MobiDBLite consensus disorder prediction 92 123 - -
Bva11g02203 1382 PANTHER COP1-INTERACTIVE PROTEIN 1 931 1290 - -
Bva11g02203 1382 PANTHER COP1-INTERACTIVE PROTEIN 1 282 345 - -
Bva11g02203 1382 PANTHER COP1-INTERACTIVE PROTEIN 1 534 934 - -
Bva11g02203 1382 Coils Coil 447 709 - -
Bva11g02203 1382 PANTHER COP1-INTERACTIVE PROTEIN 1 931 1290 - -
Bva11g02203 1382 Coils Coil 216 264 - -
Bva11g02203 1382 Coils Coil 886 920 - -
Bva11g02203 1382 Coils Coil 935 962 - -
Bva11g02203 1382 Coils Coil 398 439 - -
Bva11g02203 1382 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
Bva11g02203 1382 PANTHER COP1-INTERACTIVE PROTEIN 1 471 539 - -
Bva11g02203 1382 PANTHER COP1-INTERACTIVE PROTEIN 1 345 410 - -
Bva11g02203 1382 MobiDBLite consensus disorder prediction 92 130 - -
Bva11g02203 1382 Coils Coil 1119 1139 - -
Bva11g02203 1382 Coils Coil 272 313 - -
Bva11g02203 1382 PANTHER COP1-INTERACTIVE PROTEIN 1 282 345 - -
Bva11g02203 1382 PANTHER COP1-INTERACTIVE PROTEIN 1 408 476 - -
Bva11g02203 1382 Coils Coil 321 390 - -
Bva11g02203 1382 PANTHER COP1-INTERACTIVE PROTEIN 1 534 934 - -
Bva11g02203 1382 PANTHER COP1-INTERACTIVE PROTEIN 1 1 280 - -
Bva11g02203 1382 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
Bva11g02203 1382 PANTHER COP1-INTERACTIVE PROTEIN 1 471 539 - -
Bva11g02203 1382 PANTHER COP1-INTERACTIVE PROTEIN 1 345 410 - -
Bva11g02203 1382 SUPERFAMILY Tropomyosin 550 783 - -
Bva11g02203 1382 Coils Coil 1045 1097 - -
Bva11g02203 1382 PANTHER COP1-INTERACTIVE PROTEIN 1 408 476 - -
Bva11g02203 1382 PANTHER COP1-INTERACTIVE PROTEIN 1 1 280 - -
Bva11g02203 1382 Coils Coil 132 159 - -
Bva11g02203 1382 Coils Coil 967 1001 - -
Bva11g02203 1382 Coils Coil 717 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02203 Bva-Chr11 17915157 17922565 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02203 - - adu:107479777 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02203 11 17915157 17922565 Bva11g02203 11 17915157 17922565 ECH