Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02202 ATGGCTTCGGCCAAAGATGCAGACCCAACCTTAGGCTACCTGACTCGGAAAGACACAGAGGTGAAGCTCCCTCGACCAACTAGggttaaaaacaaaacccCAGCTCCGATACAAATCACAGCGGAGCAGATTCTGCGGGAGGCTCGTGAGCGGCAAGAGTCTGAAATCCGGCCACCAAAACAGAAGATTACTGATGTAACTGAGCTAGCGGAGTATCGTCTTCGCAAACGCAAAGAGTTCGAGGACGTAATCAGACGTATTCGATGGAACACGAGCGTTTGGGTCAAGTATGCTCAATGGGAAGAGTCACAGAAAGACTTCAATCGAGCACGCTCCGTCTGGGAACGAGCCCTGGAAGTAGATTACAAGAATCACACCCTGTGGCTTAAGTATGCTGAGGTAGAGATGAAGAACAAGTTTATCAACCATGCTAGAAATGTCTGGGATCGGGCCGTCACTCTTTTGCCTAGAGTTGATCAATTATGGTATAAATACATTCACATGGAGGAAATGCTGGGCAATGTGGCCGGTGCTAGGCAGGTTTTTGAGAGGTGGATGAGCTGGATGCCTGACCAGCAAGCATGGCTCTCTTACATCAAGTTTGAGTTAAGATATAATGAAATTGACCGAGCTAGAGGGATTTTTGAGCGATTTGTACAGTGCCATCCAAGGGTTGGGGCTTGGATACGCTATGCCAAGTTTGAGATGAAGAATGGGGAGGTGCCAAAGGCAAGGAATATTTATGAGAGAGCAGTGGAGAAGCTCGCAGATGACGAGGAAGCAGAGCAACTTTTTGTTGCATTTGCTGAATTTGAGGAAAGATGCAAAGAAACAGAACGTGCTAGGTGCATCTATAAATTTGCTCTCGATCATATTCCCAAGGGAAGAGCAGAAGATTTGTACCGGAAGTTTGTGGCCTTTGAGAAGCAGTATGGGGACAGGGAAGGTATTGAAGATGCCATTGTTGGCAAAAGGAGGTTTCAATACGAGGATGAAGTGAGAAAGAATCCTCTCAATTATGACTCTTGGTTTGATTATATAAGATTGGAAGAAAGTGTGGGCAATAAGGAAAGAATCAGGGAAGTGTATGAGAGAGCAATAGCCAATGTTCCTCCAGCAGAGGAGAAACGCTATTGGCAacgttatatttatttatgGATAAATTATGCGCTTTATGAAGAACTTGATGCTGGAGATGCTGATCGAACAAGAGATGTATACGGGGAGTGTCTCAAACTCATTCCGCATCATAAGTTTTCATTTGCGAAAATATGGCTTCTAGCAGCACAGTTTGAAATACGTCAGCTGAATCTCAAGGCTGGTCGTCAGATATTGGGAAATGCAATTGGAAGGGCTCCTAAAGATAAGATCTTTAAGAAGTATATAGAGATAGAACTCCAGCTTGGCAATATAGATCGATGTAGAAAACTGTATGAGAAGTACCTGGAGTGGTCGCCTGAAAATTGTTATGCATGGAGCAAGTATGCAGAATTGGAGAGATCTTTATGTGAGACTGAGCGAGCTAGAGCACTATTTGAGCTTGCTATTGCTCAACCAGCTCTGGATATGCCCGAGTTACTTTGGAAGGCATACATTGACTTTGAGATTGCTGAAGGTGAATTTGATAGAACCAGACAACTTTATGAGAGACTTCTTGATCGAACAAAGCACTTGAAGGTATGGATAAGCTATGCAAAGTTTGAAGTGTCCACTATGGGTGATGATGAGAGTGTTTCAACACATGAGCAAAAGAAGCAATGTATTCAGCGAGCTAGAAGGGTGTTTGAGAGAGCTGTTAATTACTTCCGAACATCGACACCAGaattgaaagaagagagagcCATGCTATTAGATGAGTGGCTCAAAGTAGAAGCTGATTTTGGTGAGCTTGGTGACGTTAACTTAGTCAAGTCTAAATTGCCTAAGAGGCTCAAGAAGAGAAGGCCAATAGTAACCGAGGATGGTCCTGCTGGGTTTGAAGAGTACATTGACTATTCATTCCCAGAGGAAGCCCAGACAACCAATCTCAAGATCTTGGAAGCTGCTTACAAGTGGAAGAAGCAAAAATTGTCTTCTGCTGAAGATTA 2087 0.4298 MASAKDADPTLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQESEIRPPKQKITDVTELAEYRLRKRKEFEDVIRRIRWNTSVWVKYAQWEESQKDFNRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQVFERWMSWMPDQQAWLSYIKFELRYNEIDRARGIFERFVQCHPRVGAWIRYAKFEMKNGEVPKARNIYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKERIREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDADRTRDVYGECLKLIPHHKFSFAKIWLLAAQFEIRQLNLKAGRQILGNAIGRAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWSPENCYAWSKYAELERSLCETERARALFELAIAQPALDMPELLWKAYIDFEIAEGEFDRTRQLYERLLDRTKHLKVWISYAKFEVSTMGDDESVSTHEQKKQCIQRARRVFERAVNYFRTSTPELKEERAMLLDEWLKVEADFGELGDVNLVKSKLPKRLKKRRPIVTEDGPAGFEEYIDYSFPEEAQTTNLKILEAAYKWKKQKLSSAED 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02202 695 SUPERFAMILY TPR-like 81 204 IPR011990 GO:0005515
Bva11g02202 695 Gene3D Tetratricopeptide repeat domain 323 522 IPR011990 GO:0005515
Bva11g02202 695 Gene3D Tetratricopeptide repeat domain 523 609 IPR011990 GO:0005515
Bva11g02202 695 Gene3D Tetratricopeptide repeat domain 121 322 IPR011990 GO:0005515
Bva11g02202 695 SUPERFAMILY TPR-like 267 523 IPR011990 GO:0005515
Bva11g02202 695 SUPERFAMILY TPR-like 526 625 IPR011990 GO:0005515
Bva11g02202 695 Pfam HAT (Half-A-TPR) repeat 207 235 IPR003107 GO:0006396
Bva11g02202 695 SUPERFAMILY TPR-like 193 263 IPR011990 GO:0005515
Bva11g02202 695 PANTHER - 22 692 - -
Bva11g02202 695 PANTHER PRE-MRNA SPLICING FACTOR 22 692 IPR045075 GO:0000398
Bva11g02202 695 SMART hat_new_1 105 137 IPR003107 GO:0006396
Bva11g02202 695 SMART hat_new_1 320 352 IPR003107 GO:0006396
Bva11g02202 695 SMART hat_new_1 398 434 IPR003107 GO:0006396
Bva11g02202 695 SMART hat_new_1 436 467 IPR003107 GO:0006396
Bva11g02202 695 SMART hat_new_1 503 537 IPR003107 GO:0006396
Bva11g02202 695 SMART hat_new_1 239 274 IPR003107 GO:0006396
Bva11g02202 695 SMART hat_new_1 539 570 IPR003107 GO:0006396
Bva11g02202 695 SMART hat_new_1 206 237 IPR003107 GO:0006396
Bva11g02202 695 SMART hat_new_1 469 501 IPR003107 GO:0006396
Bva11g02202 695 SMART hat_new_1 71 103 IPR003107 GO:0006396
Bva11g02202 695 SMART hat_new_1 354 388 IPR003107 GO:0006396
Bva11g02202 695 SMART hat_new_1 173 204 IPR003107 GO:0006396
Bva11g02202 695 SMART hat_new_1 586 619 IPR003107 GO:0006396
Bva11g02202 695 SMART hat_new_1 139 171 IPR003107 GO:0006396
Bva11g02202 695 SMART hat_new_1 276 310 IPR003107 GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02202 Bva-Chr11 17903878 17908779 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02202 K12869 - jre:108990652 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02202 11 17903878 17908779 Bva11g02202 11 17903878 17908779 ECH