Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02201 ATGGATGAAGAAGTGGTTGTTGATGCAGCATCATTGGGGGTGGCTGAGGGTGCACAACATCAGAGCAAAGAGGATGATGAGTATTCACTAAGACCTGAAAGCTGCAAAATGTTGACACCCCAAGACATTCTTGGCCCTTCTGAGGCTGACTACTCCCAGATCCCACCTCAGGAATATCTTAATATTGGACAGGGTAAAAATGTAGTTGATACCCATGTAACTACATCAGAAGATCCAAGTCAAAGCCTATTCTTGGATGATGATGGTGTCATGGAATTAACTGTGAGTTACAATGGTTCAACCTTAGATATTGGTACGTCAAACAATCGAGAAAAAATGCATAACAGGCAGAGCCATTGGCTGCATCTTTATCACCTAGCTGGTGATTCAGGAGGGGGAAATTCATTAAGTGATACTGGGTACAGAAACTGTGGTCAGGCTACTTCTAGTGGCCGGGAGGATATTGGGTCCACATTTTCCCCAGATCTATTACCTAAAAAATCACTTAGTGATGATCAGAGCAATATCATGCAACACTTGACAAATGCTGAAAATAAAGGGTGTGCAGGCAATGTTCATGGAGGAATAGGAACAAAAATGATATCCAAGTCAGGGTTTTCTGagtattttgttaaaaatgcaTTGAAGGGTAAGGGACGGGTATGCAAAGGCCCAACTTCTGATGGCTCCCGTGTTGAGTCTAGGGACCAGAATCAGATAAAGGCTGGCCTTGATACTCAGTTGGATTCTATAGCATCACCGAGCATTGGTTCCATACCTCCATATTCCTCTTCTTGTAATACTGCCGTGCCAAGACTTGGTGGGTCTGTTTGTGATGGTGTGACTTTGAGAGAATGGTTGAAACCGGGGGGCAATAAAGCAAGCAAAGCTgaatgcttatatatatataaaaatattgtggATCTGGTGGATAGCTTCCACTTTCAGGGAGTTGCCTTGCACAACCTATGCCcttcttatattaaattgcTCCCATCTAACGAGGTCATGTACCTTGGGTTACCTCTTCAGAAACAGATGATAGATAATGTCGTAAATTCTGAAGCTcttcatttaaataattcttcaGGCAGAAAAAGGCCATCAGAGCAGGTGACTATTCCATCTCatgatatttggtcaaagaaacataaatttaatgaaaatgcgAGAGTTACAGGGGTTTGGAGTCAGTTCCCTCCAAGATCTGATTTATATCCTCGAACTGCTAGTGATAGTGAAGTCAATGTGATTGGAtcacaaaattattacaatgaATCTGAGGAGGATATCCAAATTTCTAGACTTGGTATTCAGAGAATGACCTGCTTCCCCCGTATATCTAATGCAGGCCGGTTGCAATTGACATCTGCAAGTGGTAGAATGGAAGATAAGTGGTACACAAGTCCTGAGGGAGGTTGtacaatattatcaaatatctATTGTTTGGGTGTCCTTCTTTTTGAGTTACTGGGCCGTTTTGACTCTGAAGGAGCACATATTGCAGCAATGACAGATCTTCATCATAGGATTCTTCCTCCAGTTTTTCTGTCAGAAAATATTAAGGAAGCTGGATTTTGTCTTTGGCTTCTGCATCCTGAACCATCTTCACGTCCAACAACAAGGGAAATCCTACAATCTGAAGTAATTAGTGGATTGCAGGAGGTATATAGTGAGGAATTGTCATCAAGTATTGACCAGGATGATGCAGAATCAGAACTATTATTGCATTTCCTACTCTCATTACAGGAGCAGAAACAGAAGGATGCCTCCACATTGGTGGAAGAAATCAAATGCTTGGAATCAGATATTAAAGAGGTTGAGAGAAGGCATGACTCAAAAAAATCCTCAGTTTCGGCTTTACAGAATGAATCTAGTTATCAGAATGAGAGTGAACCTTTGAACAAAGAACCTTTGAGGTCAGAGACAGTACCCCCGATATCCCAGCTTGAAAGTGCTTACTTTTCCATGAGATCAAAAATTCAGCTAGCCGAAACAGGTTCTGCAACTCACCCAGATGTAGACTTACTAAGAAATCGTGAGAACTGGCATTTGGCTCAGAAAGatgaggaaaaacaaaaagcaacAGATCCTCTAGGAATCTTCTTTGATGGATTGTGCAAGTATGCTCGTTATAACAAGTTTGAAGTGCGTGGTGTACTAAGAAATGCAGATCTTAACAATCCTGCAAATGTAATATGCTCTCTGAACTTTGATCGAGATGAGGACTACTTTGCTGCTGCTGGggtatcaaagaaaataaagatttttgaGTATAATGCACTTCTCAATGACTCTGTTGATATCCATTATCCAGTAGTTGAAATGTTGAACAAATCAAAGCTCAGCTGTGTCTGCTGGAATAACTATATCAAGAACTATCTTGCTTCCACGGACTATGATGGTGTAGTTAAGTTATGGGATGCTAGCATTGGCCAAGGATTTTCTCAATTTACTGGGCACGAAAAGAGGGCTTGGTCTGTTGACTTCTCTCCAGTATATCCTACAAAATTTGCTAGTGGAAGTGATGATTGTTCTGTCAAGCTCTGGAGCATCAGTGAGAAAAACTGTTTAGACACAATCAACAATGTTGCTAATGTTTGCTGTGTTCAATTCTCTGCTCACTCCACTCATTTGTTGGCCTTCGGATCTGCGGATTACACTACTTATTGCTATGATCTTCGTAATGTTAGAGCTCCCTGGTGTGTGTTGGTTGGCCATAAAAAAGCAGTCAGCCATGTCAAATTCTTAGACTCTGAGACTCTTGTTTCTGCATCTACTGataacacattaaaaatttgGGATCTCAAGAAAACCTCTTCAGCAGGTCCATCCACTAGTGCGTCCACTAGTGCGTGCAGCTTAACCCTTTCAGGACATACTAACGAGAAGAACTTTGTGGGTTTATCAGTTGCTGATGGATATATAGCATGTGGTTCAGAAACAAATGagGTTTATGCCTACTACAGATCTCTTCCCATGCCAATCGCCTCGCACAAGTTTGGGTCCATTGATCCCATCTCTGGCAAGGAGACTAATGATGACAATGGACAGTTTGTTTCTAGTGTGTGCTGGAGAAGGAAATCAGACTCGGTTATTGCTGCCAACTCAAGTGGGTGGATAAAAGTGTTACAGATGGTTTA 3143 0.3942 MDEEVVVDAASLGVAEGAQHQSKEDDEYSLRPESCKMLTPQDILGPSEADYSQIPPQEYLNIGQGKNVVDTHVTTSEDPSQSLFLDDDGVMELTVSYNGSTLDIGTSNNREKMHNRQSHWLHLYHLAGDSGGGNSLSDTGYRNCGQATSSGREDIGSTFSPDLLPKKSLSDDQSNIMQHLTNAENKGCAGNVHGGIGTKMISKSGFSEYFVKNALKGKGRVCKGPTSDGSRVESRDQNQIKAGLDTQLDSIASPSIGSIPPYSSSCNTAVPRLGGSVCDGVTLREWLKPGGNKASKAECLYIYKNIVDLVDSFHFQGVALHNLCPSYIKLLPSNEVMYLGLPLQKQMIDNVVNSEALHLNNSSGRKRPSEQVTIPSHDIWSKKHKFNENARVTGVWSQFPPRSDLYPRTASDSEVNVIGSQNYYNESEEDIQISRLGIQRMTCFPRISNAGRLQLTSASGRMEDKWYTSPEGGCTILSNIYCLGVLLFELLGRFDSEGAHIAAMTDLHHRILPPVFLSENIKEAGFCLWLLHPEPSSRPTTREILQSEVISGLQEVYSEELSSSIDQDDAESELLLHFLLSLQEQKQKDASTLVEEIKCLESDIKEVERRHDSKKSSVSALQNESSYQNESEPLNKEPLRSETVPPISQLESAYFSMRSKIQLAETGSATHPDVDLLRNRENWHLAQKDEEKQKATDPLGIFFDGLCKYARYNKFEVRGVLRNADLNNPANVICSLNFDRDEDYFAAAGVSKKIKIFEYNALLNDSVDIHYPVVEMLNKSKLSCVCWNNYIKNYLASTDYDGVVKLWDASIGQGFSQFTGHEKRAWSVDFSPVYPTKFASGSDDCSVKLWSISEKNCLDTINNVANVCCVQFSAHSTHLLAFGSADYTTYCYDLRNVRAPWCVLVGHKKAVSHVKFLDSETLVSASTDNTLKIWDLKKTSSAGPSTSASTSACSLTLSGHTNEKNFVGLSVADGYIACGSETNEVYAYYRSLPMPIASHKFGSIDPISGKETNDDNGQFVSSVCWRRKSDSVIAANSSGWIKVLQMV 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02201 1047 PANTHER PROTEIN SPA1-RELATED 2 1 1047 - -
Bva11g02201 1047 MobiDBLite consensus disorder prediction 1 30 - -
Bva11g02201 1047 ProSitePatterns Trp-Asp (WD) repeats signature. 922 936 IPR019775 -
Bva11g02201 1047 Gene3D - 703 1047 IPR015943 GO:0005515
Bva11g02201 1047 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 818 853 - -
Bva11g02201 1047 Coils Coil 583 624 - -
Bva11g02201 1047 PANTHER PROTEIN SPA1-RELATED 2 1 1047 IPR044630 GO:0009640
Bva11g02201 1047 SUPERFAMILY WD40 repeat-like 726 1044 IPR036322 GO:0005515
Bva11g02201 1047 MobiDBLite consensus disorder prediction 611 643 - -
Bva11g02201 1047 SUPERFAMILY Protein kinase-like (PK-like) 278 557 IPR011009 -
Bva11g02201 1047 SMART WD40_4 811 851 IPR001680 GO:0005515
Bva11g02201 1047 SMART WD40_4 897 935 IPR001680 GO:0005515
Bva11g02201 1047 SMART WD40_4 854 893 IPR001680 GO:0005515
Bva11g02201 1047 SMART WD40_4 950 989 IPR001680 GO:0005515
Bva11g02201 1047 SMART WD40_4 770 808 IPR001680 GO:0005515
Bva11g02201 1047 SMART WD40_4 714 758 IPR001680 GO:0005515
Bva11g02201 1047 MobiDBLite consensus disorder prediction 618 634 - -
Bva11g02201 1047 Pfam WD domain, G-beta repeat 903 935 IPR001680 GO:0005515
Bva11g02201 1047 Pfam WD domain, G-beta repeat 815 851 IPR001680 GO:0005515
Bva11g02201 1047 ProSiteProfiles Trp-Asp (WD) repeats profile. 904 944 IPR001680 GO:0005515
Bva11g02201 1047 PRINTS G protein beta WD-40 repeat signature 795 809 IPR020472 -
Bva11g02201 1047 PRINTS G protein beta WD-40 repeat signature 838 852 IPR020472 -
Bva11g02201 1047 PRINTS G protein beta WD-40 repeat signature 922 936 IPR020472 -
Bva11g02201 1047 Gene3D Transferase(Phosphotransferase) domain 1 278 561 - -
Bva11g02201 1047 ProSiteProfiles Trp-Asp (WD) repeats profile. 818 860 IPR001680 GO:0005515
Bva11g02201 1047 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 904 937 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02201 Bva-Chr11 17893087 17901508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02201 838 988 Miscellaneous Gene Families AT5G08390 28.758 6.02e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02201 K16240 - gmx:100776980 1313.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02201 11 17893087 17901508 Bva11g02201 11 17893087 17901508 ECH