Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02198 ATGCACctcaatttcttcctctttgcCTTGATCGGCTGCATTATGACGTCCTCTGTAATTTCAACCACAAATCACGTCGTCGGAGATGCTGTCGGTTGGAATCTTCCCCCCAACCCAACCTTCTATTCCAACTGGGCTAAGAAAAAAGTCTTCCGTGTTGGTGACATACTTGAATTTCCATACAGCCCTGGGTTGAGCAACGTTGTGCAAGTTAGGAAGGAGGACTTCGACGTATGCTCCATGAGAAGTGACATTAAACAATACTACGAAGGAAACTCCAAGGTTACCCTGGATAAGTCAGGCGACTTCTACTTCTTCTGTTCGGTCGGCAAACATTGTGAATTCGGACAAAAGCTCCACGTCACTGTTTCTTG 374 0.4385 MHLNFFLFALIGCIMTSSVISTTNHVVGDAVGWNLPPNPTFYSNWAKKKVFRVGDILEFPYSPGLSNVVQVRKEDFDVCSMRSDIKQYYEGNSKVTLDKSGDFYFFCSVGKHCEFGQKLHVTVS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02198 124 ProSitePatterns Type-1 copper (blue) proteins signature. 101 117 IPR028871 -
Bva11g02198 124 Pfam Plastocyanin-like domain 33 117 IPR003245 GO:0009055
Bva11g02198 124 SUPERFAMILY Cupredoxins 23 123 IPR008972 -
Bva11g02198 124 PANTHER BLUE COPPER PROTEIN 1 123 IPR039391 GO:0009055
Bva11g02198 124 Gene3D - 22 124 IPR008972 -
Bva11g02198 124 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Bva11g02198 124 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02198 Bva-Chr11 17883112 17883860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02198 24 123 Miscellaneous Gene Families AT5G20230 42.000 3.44e-24 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02198 - - gmx:102660389 159.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02198 11 17883112 17883860 Bva11g02198 11 17883112 17883860 ECH