Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02189 ATGGAGGCTTCAGCAGCTTTGTCACGCATAGGGCTAGCCGGGCTAGCCGTTATGGGCCAAAACCTAGCCCTCAACATTGCCGAGAAAGGTTTTCCGATCTCCGTCTACAATCGTACCACTTCCAAAGTCGATGAGACCGTGGATCGAGCTCGCCAGGAGGGTGGGCTTCCACTGTTTGGTCAATACAACCCTCGGGATTTCGTCCTCTCTCTCGAAAGACCTAGATCAGTCATCATCCTCGTCAAGGCTGGTGCTCCTGTTGACCAAACTATCGCTGCCCTCTCCGAACACATGGAATCCGGTGATTGCATCATCGACGGCGGCAACGAGTGGTACGAGAACACCGAGCGTCGAATCACAGAAGTCTCTGACAAGGGTATACTCTATTTGGGCATGGGCGTATCTGGTGGCGAAGAAGGTGCCCGAAATGGACCCTCTTTGATGCCTGGGGGTTCTTATCAGGCTTACTTAAACGTCGAAGACATACTGATGAAAGTCGCCGCTCAAGTGGAGGATGGCCCATGCGTTACTTACATTGGTGAGGGTGGGTCTGGAAATTTCGTTAAGATGGTCCACAACGGTATTGAATACGGAGATATGCAGCTCATTTCTGAGGCCTACGACGTATTGAAGCACGTTGGTGGGTTGTCAAATTCAGAGCTTTCTGAGATTTTCAGTGAATGGAACAGAGGGGAACTTGAAAGTTTCCTAATTGAGATTACTGCTGATATTTTCAAAGTTAGGGATGAAGCTGGAGACGGGGATTTGGTAGATAAGATTTTGGATAAAACGGGTATGAAGGGTACTGGAAAATGGACGGTACAGCAGGCAGCTGAACTGTCAGTTGCGGCTCCTACAATTGCTGCTTCATTGGATTGCCGGTACTTGAGCGGATTAaagggggagagagagaatgcTGCCAATGTATTGAAGGATGCTGGATTACATGTCGAAGTGGGGCCTGTGAAGGGAGGGGTTGATAAGAAGCGATTGATAGATGATGTGAGGCAGGCCTTGTATGCCTCCAAAATTTGTAGCTATGCTCAGGGGATGAACTTATTGAGGGCTAAGAGTAATGAGAAAGCATGGAATTTGAATTTCGGTGAATTGGCTAGGATTTGGAAAGGTGGGTGTATCATACGGGCAGTGTTTTTGGATAGGATTAAGAAGGCTTATCAGAGAAATCCCAATTTGGCTAGTTTAATTGTTGACCCAGAATTTGCAAAGGAGATGGTGCAAAGGCAGGCAGCTTGGAGAAGAGTTGTGGGATTAGCCATCTCAGCTGGGATCAGCACTCCTGGGATGTGTGCTAGTCTTGCTTACTTTGATACGTACAGGAGAGCAAGGCTTCCAGCCAACCTTGTTCAGGCTCAGAGAGATTTGTTTGGGGCTCATACATATGAGCGAATTGATCGCCCTGGGTCATTCCACACCGAATGGACAAAACTTGCTCGCAAGAGTGGTGCTGGAGTTGGTGCTCTGAATTG 1487 0.4761 MEASAALSRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVDRARQEGGLPLFGQYNPRDFVLSLERPRSVIILVKAGAPVDQTIAALSEHMESGDCIIDGGNEWYENTERRITEVSDKGILYLGMGVSGGEEGARNGPSLMPGGSYQAYLNVEDILMKVAAQVEDGPCVTYIGEGGSGNFVKMVHNGIEYGDMQLISEAYDVLKHVGGLSNSELSEIFSEWNRGELESFLIEITADIFKVRDEAGDGDLVDKILDKTGMKGTGKWTVQQAAELSVAAPTIAASLDCRYLSGLKGERENAANVLKDAGLHVEVGPVKGGVDKKRLIDDVRQALYASKICSYAQGMNLLRAKSNEKAWNLNFGELARIWKGGCIIRAVFLDRIKKAYQRNPNLASLIVDPEFAKEMVQRQAAWRRVVGLAISAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERIDRPGSFHTEWTKLARKSGAGVGALN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02189 495 Gene3D - 450 482 - -
Bva11g02189 495 Gene3D - 6 186 - -
Bva11g02189 495 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 9 180 IPR006115 GO:0050661
Bva11g02189 495 SMART 6PGD_2 185 481 IPR006114 GO:0004616|GO:0006098
Bva11g02189 495 TIGRFAM gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 10 481 IPR006113 GO:0004616|GO:0006098
Bva11g02189 495 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 1 490 IPR006183 GO:0004616
Bva11g02189 495 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 183 482 IPR008927 -
Bva11g02189 495 PIRSF 6PGD 2 488 IPR006113 GO:0004616|GO:0006098
Bva11g02189 495 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING 3, CHLOROPLASTIC 1 490 - -
Bva11g02189 495 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 182 IPR036291 -
Bva11g02189 495 Pfam 6-phosphogluconate dehydrogenase, C-terminal domain 185 480 IPR006114 GO:0004616|GO:0006098
Bva11g02189 495 PRINTS 6-phosphogluconate dehydrogenase signature 8 31 IPR006183 GO:0004616
Bva11g02189 495 PRINTS 6-phosphogluconate dehydrogenase signature 126 151 IPR006183 GO:0004616
Bva11g02189 495 PRINTS 6-phosphogluconate dehydrogenase signature 370 392 IPR006183 GO:0004616
Bva11g02189 495 PRINTS 6-phosphogluconate dehydrogenase signature 73 102 IPR006183 GO:0004616
Bva11g02189 495 PRINTS 6-phosphogluconate dehydrogenase signature 256 283 IPR006183 GO:0004616
Bva11g02189 495 PRINTS 6-phosphogluconate dehydrogenase signature 174 202 IPR006183 GO:0004616
Bva11g02189 495 Gene3D - 187 448 IPR013328 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02189 Bva-Chr11 17855875 17857651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02189 K00033 - zju:107406734 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02189 11 17855875 17857651 Bva11g02189 11 17855875 17857651 ECH