Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02188 atgCAGCATGCTTTGCTGAATGTTCTCGAGAATATGAAAGGAATTAAGTATGGAAATTCTAATCTATGGTTTCATGGCAAGGAGAAAGATGATTCTATGTCACTCATGAGCACTATCTCGGAGGCAGATTATCTTCTAAGTAACTACCCACCCAGAGAGCTGAAGGATGGCATCTTGCTTATTGCCAAACCATCTGCTTTAAAGAACCAAATCTTCAGCTCGTCTCTCCATGGTTTGAATCTTCTTGGTCTTGAGAAATCTCAAATGAAAGATTCGAAATTTCAAATACCTGCACTTATCAGTATCAATTTGACTGACTGGTACATCAGAAAATCGAACGTGGATCTGTTCGACCCTCATGCGCTCATGGAGGAATGCTTGCTCACCAAGAATAACGAGCCCGCATCTGAATCTGACTTCGGATTCGCATTCAATGATAGCAATTTCTCTGATCGAGTTCTCACAATTGAGGTTTTACCCGATTTGCCCGACACTAAATCCGACGCTGAAGGCTGTACCAGCATCGCTATTTGGGCTCGCAATCGCAAGAGACGGAGACAGGAGATTAGGAAAGAAGCCGctACAAATGTCCCCGTGCACCATGAGGAACAAGTTCTAAATTGTAACATGCCAGATGCAGAGGAACCTGTGtcttatgaaaataatgatgacGAACCTATGGCAATGATTGAGGAATCACCTTCAGGTCATGAAGTTGCTCAAGGCAGTGATTTATCACAGAGCACAAGTTGctcaaaagttttaagtgtCAGGACTGTACATATTAGTTCTCCAATTCTTGCAGCAAAGAGCCCTTTCTTTTACAAATTGTTTTCAAATGGGATGAGAGAATCAGAGCAAAGGAATGTGACTTTACGAATTCATGCTTCTGAAGAAGCTGCCCTTATGGACCtacttaattttatgtatagtaatactttatcAAAGACAACACCTTCTGCACTGTTGGATGTGCTAATGGCTGCTGATAAATTTGAGGTTGCATCATGCATGAGGTATTGCAGTAAGTTGTTGAGGAATATCCCTATGACTTGTCAGTCTGCCTTGCTCTATTTGGATCTTCCTTCTACTGTTCTGATGGCAGATGCAGTTCAGCCACTGACAGATGCAGCAAAGCAGTTTCTTGCCTTGCGCTACAGAGACATAAGCAAGAGCCCAGAGGAGGTGCTGAATTTGCCCTTGGCTGGTGTAGAGGCAGTGCTTTCGAGTGATGAACTCCAGGTCGCTTCAGAGGATTCTGTGTATGATTTTGTGCTCAAGTGGGCTAGAATGCATTATCCAAAAATTGAGGACCGGCGAGTAGTCCTTGGATCACGGCTTGCTCGACTCATCCGTTTTCCACACTTGACGTGCCGAAAACTGAAGAAGATCTTAACATGCAATGAATTTGATGCTGACCTCGCATCAAAGGCCGTACTTGAGGCACTCTTTTTCAAGGCAGAGACATCATATCGGCAACGGGCTCTTGCTTCAGAGGATGGTAGTGCTAGTGCTAGTGCTACTGCTACTGCTGCGTGTCATCGTTTTGTTGAGCGAGCATACAAGTATCGCCCTGTTAAGGTGGTTGAATTTGAATTGCCCCGACCACAGTGTATTGTATACCTTGacttgaagaaagaagaatgtaCACATCTGTATCCGGCTGGTCGAGTTTACTCACAAGCATTCCACTTGGATGGGCAAGGGTTTTTCTTGTCGGCTCATTGCAATATGGACCAGCAAAGCTCGTTCCATTGCTTTGGCCTTTTCCTGGGGATGCAAGAGAAGGGATCGGTCTCTTTCACTGTTGATTATGAATTTGCAGCAAGATCAAAGCCCACCGAGGAGTATACGAGCAGGTATAAGGGAAATTATACTTTCACTGGAGGGAAGGCTGTTGGGTATAGAAACCTGTTTGGCATACCATGGACTGCATTCATGGCCGATGATAGCCATTATTTCATCAATGGTATACTTCATCTCAGGGCTGAACTCACTGTTAGGAAATG 2009 0.4276 MQHALLNVLENMKGIKYGNSNLWFHGKEKDDSMSLMSTISEADYLLSNYPPRELKDGILLIAKPSALKNQIFSSSLHGLNLLGLEKSQMKDSKFQIPALISINLTDWYIRKSNVDLFDPHALMEECLLTKNNEPASESDFGFAFNDSNFSDRVLTIEVLPDLPDTKSDAEGCTSIAIWARNRKRRRQEIRKEAATNVPVHHEEQVLNCNMPDAEEPVSYENNDDEPMAMIEESPSGHEVAQGSDLSQSTSCSKVLSVRTVHISSPILAAKSPFFYKLFSNGMRESEQRNVTLRIHASEEAALMDLLNFMYSNTLSKTTPSALLDVLMAADKFEVASCMRYCSKLLRNIPMTCQSALLYLDLPSTVLMADAVQPLTDAAKQFLALRYRDISKSPEEVLNLPLAGVEAVLSSDELQVASEDSVYDFVLKWARMHYPKIEDRRVVLGSRLARLIRFPHLTCRKLKKILTCNEFDADLASKAVLEALFFKAETSYRQRALASEDGSASASATATAACHRFVERAYKYRPVKVVEFELPRPQCIVYLDLKKEECTHLYPAGRVYSQAFHLDGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFTVDYEFAARSKPTEEYTSRYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSHYFINGILHLRAELTVRK 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02188 669 Gene3D Potassium Channel Kv1.1; Chain A 242 366 IPR011333 -
Bva11g02188 669 SUPERFAMILY TRAF domain-like 555 668 - -
Bva11g02188 669 SMART BTB_4 249 349 IPR000210 GO:0005515
Bva11g02188 669 Pfam BTB/POZ domain 259 347 IPR000210 GO:0005515
Bva11g02188 669 Pfam BTB And C-terminal Kelch 372 464 IPR011705 -
Bva11g02188 669 PANTHER OS02G0260700 PROTEIN 127 669 IPR045890 -
Bva11g02188 669 Gene3D - 367 480 - -
Bva11g02188 669 SUPERFAMILY POZ domain 259 346 IPR011333 -
Bva11g02188 669 SMART BACK_2 364 466 IPR011705 -
Bva11g02188 669 PANTHER - 127 669 - -
Bva11g02188 669 CDD BTB_POZ_ZBTB_KLHL-like 258 332 - -
Bva11g02188 669 ProSiteProfiles BTB domain profile. 243 318 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02188 Bva-Chr11 17849702 17855522 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02188 - - vvi:104881174 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02188 11 17849702 17855522 Bva11g02188 11 17849702 17855522 ECH