Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02168 ATGGATGAGAATTTGCTTGACGATATTATTCAAAGGCTTATATCAGCAAAGAATGGCAGAACGACGAAGCAGGTGCAGCTTACAGAATCCGAAATCCGACAGCTATGCGTCGTGTCGAAGGAGATTTTTCTCAGTCAGCCCAATCTTCTCGAACTGGAAACTCCTATGAAGATTTGCGGAGATGTCCACGGTCAATTTTCAGATCTTTTAAGGTTGTTTGAGTATGGTGGATACCCACCAGAGgccaattatttatttcttggaGATTATGTTGATCGTGGCAAGCAAAGCATAGAGACTATATGTTTACTCTTTGCATACAAGATCAAGTACAAAGAgaacttctttcttctcaggGGCAACCATGAATGTGCTTCCATCAATCGAATATATGGTTTTTATGATGAGTGCAAAAGGAGGTTTAATGTTCGTACTTGGAAGACTTTTACTGAATGCTTTAACTGTCTGCCTGTTGCTGCTCTTATTGATGAGAAGATCCTTTGCATGCACGGTGGACTCTCTCCTGAGCTCAAAAGCTTGGATCAGATAAGGAATATTGCTCGGCCTGTTGATGTGCCAGACCAGGGCCTTCTCTGTGACCTGCTATGGGCTGATCCTGATAAAGATCTTGATGGCTGGGGAGAAAATGACCGAGGTGTGTCATATACCTTTGGGGCTGACAAGGTTGTAGAGTTCCTTCAGAAACATGATCTTGATCTGATTTGCAGAGCTCACCAGGTAGTGGAGGATGGATATGAGTTTTTCGCAAAGCGGCAGCTGGTGACCATATTCTCCGCACCAAATTATTGTGGCGAGTTTGATAATGCTGGTGCTATGATGAGTCATGTTGAGACCAGAAACTCCACCCCATCAGtGTGGGAACGgttaattcatataaataagCTGCAACTCAAAGGTTTTCTATGCCTGGCAGTGTCCACAAGATTTGATGTATG 956 0.4142 MDENLLDDIIQRLISAKNGRTTKQVQLTESEIRQLCVVSKEIFLSQPNLLELETPMKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLFAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRTWKTFTECFNCLPVAALIDEKILCMHGGLSPELKSLDQIRNIARPVDVPDQGLLCDLLWADPDKDLDGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSHVETRNSTPSVWERLIHINKLQLKGFLCLAVSTRFDV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02168 318 SMART pp2a_7 27 297 IPR006186 GO:0016787
Bva11g02168 318 Pfam Serine-threonine protein phosphatase N-terminal domain 6 53 IPR031675 -
Bva11g02168 318 CDD MPP_PP1_PPKL 6 285 - -
Bva11g02168 318 ProSitePatterns Serine/threonine specific protein phosphatases signature. 118 123 IPR006186 GO:0016787
Bva11g02168 318 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 285 - -
Bva11g02168 318 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 285 - -
Bva11g02168 318 SUPERFAMILY Metallo-dependent phosphatases 20 284 IPR029052 -
Bva11g02168 318 Gene3D - 1 303 IPR029052 -
Bva11g02168 318 Pfam Calcineurin-like phosphoesterase 58 247 IPR004843 GO:0016787
Bva11g02168 318 PRINTS Serine/threonine phosphatase family signature 117 141 IPR006186 GO:0016787
Bva11g02168 318 PRINTS Serine/threonine phosphatase family signature 151 177 IPR006186 GO:0016787
Bva11g02168 318 PRINTS Serine/threonine phosphatase family signature 237 257 IPR006186 GO:0016787
Bva11g02168 318 PRINTS Serine/threonine phosphatase family signature 259 275 IPR006186 GO:0016787
Bva11g02168 318 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Bva11g02168 318 PRINTS Serine/threonine phosphatase family signature 180 207 IPR006186 GO:0016787
Bva11g02168 318 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02168 Bva-Chr11 17741969 17746626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02168 58 243 Calmodulin-binding Proteins AT5G63870 30.317 2.57e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02168 K06269 - cit:102611078 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02168 11 17741969 17746626 Bva11g02168 11 17741969 17746626 ECH