Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02167 ATGACTGGCACGATGTTGCAGCAACCCACTGCGCCGCTGGCATATGCCGGATTAAACATCGGACTTGGAAACCAATTATCGCCATCTTTGGTTAATGCGTATCGAATCAACGCCGTTGCCGAGCGATTATCTACGCATGTTCAACCTGGCCACCGAAGCGACTCCGTTGAATTCTTTAACCTCTGCCTCTCGCTCGCCAGAGGCATTGATTATGCAGTTTCCAATAACGAAGTTCCAATCAAAGCTCAGGATTTACCTGCATTGTTGAAGCAGATATGTCAACGAAAGCATGATGCCTTTTTGCAAGGAGCAATCATGGTTCTGATGATCTCTGTAAAGAATGCTTGTAAAATTGGATGGTTCAAGAAGAAAGAGACCGAAGAACTTCTTACTATTGCTAATGAGATAGTAAAGATCTACTGCAGCATGGGGGATGTTAATGCAGGACCTAGTGATTGCAATACCACAATCTCTATAATTATGCAGAGGTTCTATCCTCAGCTGAAAGTTGGGCAGATACTTGCTTCACTTAAAGTCAATCCGGGATATGGAGCTTTTGTTGTTGATTTCCAGATATTGAAGAATACATTTCGTTCTCCacaagataaaattCGGTTATTGGTAGCACAAACTGATAAGTTAGATACGTCTGCATGCATCATAAGTCCTCAGCAAGTCAACTTTCTTCTGAACGGAAAGGGAGTATTCGGAAGGACTAATGTTCAAATGgACACTGGACCACAGCTTCCTACAATTGTGACTAATATGCTTAAATATGGAACAAATATTCTTCAAGCTGTGGGCCAGTTTGATGGTCATTACGTTATTGTTGTTGCCTTTATGGGTGTGACAACGTTACCTGCAAATCCAGTACTTCAAGACTATGTTCAGCCTTCTGTAACCTTAGTTGAgtcagATTCTGATATTATTGAGGGTCCATCACGAATTTCACTAAATTGCCCCATAAGCTTTTCACGTATCAAGACTCCTGTTAAAGGACGTTCATGCAAACATCTTCAGTGTTTCGATTTTAGTAACTTCATTGATATAAATTCAAGGAGGCCATCGTGGCGCTGCCCTCATTGTAATCAGTATGTCTGCTATACAGATATTTGTCTAGATCGAAATATGGTTGAGGTCCTCAAAGATGTAGGTGAGAATATTGTGGAAGTGATTGTCTGTGCTGATGGATCATGGAAGGCAGTTTTAGAAAATGATGGGAATGCAGACAAGACACAAAATAAGGTCCCTGATTGTGAAAAGGAGCATATTGAGCCACAAGAGCCTACTTGCTCCCCCAGGGCCCTTCCTGATGTTCTAGACCTCacaaatgatgatgatgatgatcagATGGAGATAATGAACGTTCATGAAACTGAAGATAGAAAACCTCTCCGGGCAGATCTTCTTAGGCAATCCAATGTTGCTGCTCAGGTAGAAGATGGCATTCAGCCTGGAATCTATCCAACTCATAGTAGGTCAGATACCCCTGCGATTGGTCGCATATCTGAACATCCTGTTCTGGCTGATGCAATTTCTCCAGTATTTAATCAAGAAGCTGAGGGTCATGGTGATTCACTTGCTACAAATTCTGTCATGCAAAATCCACTCTCTGTACCAAATAATCTTCTGCCACAACAGTTCAATTATGTGAATTTAGCTGTCAATGAGTATGGGAGATCAGCTCCAATACCAACACATGTCAGAGATCCAACAGTATTGCAAGCCCTTCAGGCCCTCCCAGTGCAATCTCCGATTATAGGCTCACAACAAAGATCAAGAACTAGTTTTAATTCTGTGTTACCGAGCAGTTCCTCCATTTCTCCTCCTGTTTCTTTGTCCAACCCAGCCAGTGTAGATGTCTTCAATGCTATACTGAGTGATACAGAAAGACAGCAGCTCTTCTGTCGACCTTCTATGACTCTGCCTCAGGTCTCAAGTGttgcttcatcttcattgcaGCATCGAACTACGCAGGCCTCACCGAATGTCAATGGTTCAGCACCAAGTCATTTGCCAAGTTCATACCGATCTGGGTTAACGGAACTGCGAAATCCACACTTGCAGCAAGCTCTTAACCCAAGGACAACCCAACCAGTGGGTCAGTCTTCAAGCAACATGCGAACACCAACAAATCCCCAACGGGGTGTCATTGGTCGGGCAGCCGGAACTAGTACGAATAGTCAACACTACAGGGTTCATCCCTCGGTTGGCGTTCCAGTTCCAGTTCAATCCCAAACATCCAGAACAGGTACATCGTTTACTGCTAACAATTTCCGGGGACTAGCAGCAGAGCAGAGAGGAAATGGAATTAACATGGGAGGGCGAGGGACGGCAGCAGAGTCAATTTCTAGGTCTGGtaataattcatttgattccCAAGGGGAGCAGAATTGGCGACGAATGCGTGGTAGTCTACTAGGTCGGTCATATCCCGCTGTTGTTGAACAGTTGATCATTGGACCAACACAAGCAGTGCAAAGTGCAAGACCACAACCGCAACCTCAACCTCCAACCAGTGTTTCTCAGGCACTCAATCTCCATCCATA 2549 0.4296 MTGTMLQQPTAPLAYAGLNIGLGNQLSPSLVNAYRINAVAERLSTHVQPGHRSDSVEFFNLCLSLARGIDYAVSNNEVPIKAQDLPALLKQICQRKHDAFLQGAIMVLMISVKNACKIGWFKKKETEELLTIANEIVKIYCSMGDVNAGPSDCNTTISIIMQRFYPQLKVGQILASLKVNPGYGAFVVDFQILKNTFRSPQDKIRLLVAQTDKLDTSACIISPQQVNFLLNGKGVFGRTNVQMDTGPQLPTIVTNMLKYGTNILQAVGQFDGHYVIVVAFMGVTTLPANPVLQDYVQPSVTLVESDSDIIEGPSRISLNCPISFSRIKTPVKGRSCKHLQCFDFSNFIDINSRRPSWRCPHCNQYVCYTDICLDRNMVEVLKDVGENIVEVIVCADGSWKAVLENDGNADKTQNKVPDCEKEHIEPQEPTCSPRALPDVLDLTNDDDDDQMEIMNVHETEDRKPLRADLLRQSNVAAQVEDGIQPGIYPTHSRSDTPAIGRISEHPVLADAISPVFNQEAEGHGDSLATNSVMQNPLSVPNNLLPQQFNYVNLAVNEYGRSAPIPTHVRDPTVLQALQALPVQSPIIGSQQRSRTSFNSVLPSSSSISPPVSLSNPASVDVFNAILSDTERQQLFCRPSMTLPQVSSVASSSLQHRTTQASPNVNGSAPSHLPSSYRSGLTELRNPHLQQALNPRTTQPVGQSSSNMRTPTNPQRGVIGRAAGTSTNSQHYRVHPSVGVPVPVQSQTSRTGTSFTANNFRGLAAEQRGNGINMGGRGTAAESISRSGNNSFDSQGEQNWRRMRGSLLGRSYPAVVEQLIIGPTQAVQSARPQPQPQPPTSVSQALNLHP 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02167 849 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 286 401 IPR013083 -
Bva11g02167 849 ProSiteProfiles Zinc finger SP-RING-type profile. 305 386 IPR004181 GO:0008270
Bva11g02167 849 MobiDBLite consensus disorder prediction 777 796 - -
Bva11g02167 849 MobiDBLite consensus disorder prediction 825 849 - -
Bva11g02167 849 MobiDBLite consensus disorder prediction 740 754 - -
Bva11g02167 849 Pfam MIZ/SP-RING zinc finger 316 364 IPR004181 GO:0008270
Bva11g02167 849 MobiDBLite consensus disorder prediction 694 733 - -
Bva11g02167 849 MobiDBLite consensus disorder prediction 588 613 - -
Bva11g02167 849 MobiDBLite consensus disorder prediction 647 679 - -
Bva11g02167 849 PANTHER E4 SUMO-PROTEIN LIGASE PIAL2-LIKE 20 670 - -
Bva11g02167 849 MobiDBLite consensus disorder prediction 694 754 - -
Bva11g02167 849 MobiDBLite consensus disorder prediction 779 796 - -
Bva11g02167 849 CDD SP-RING_PIAS_like 317 364 - -
Bva11g02167 849 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 20 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02167 Bva-Chr11 17732779 17740077 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02167 K04706 - gmx:100780539 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02167 11 17732779 17740077 Bva11g02167 11 17732779 17740077 ECH