Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02165 ATGGGGTACAAATTGGTTGTCTGTAGCCTGGTCTTGTGGTGTGTCTTGGTAGGTCACAATGGGCTAGCTAGGATGGATAATAGGTTAAATGACTCAGACTCGGGCTTAGCTTATGACTATGGAGGTGCTCTTGGCAAAGCCATCATGTTTTTTGAGGGACAACGCTCAGGGAAGTTGCCCACCAGCCAAAGAGTCAATTGGAGGGGAGACTCTGCCCTCTCCGATGGCAAACTCGAAAATgtGAATTTGATTGGAGGGTACTATGATTCGGGTGACCATGTCAAGTTTGGATGGCCGATGGCGTTTACAGTAAGCCTATTGAGTTGGGCAGCTGTTGAGTACGAGAGTGAGATATCTTCAGTGAACCAGCTTGGCTACCTCAGCAGCGCCATCCGATGGGGCTCTGATTTTTTAATGCATGCTCATACTTCACCAACTACCCTTTATACACAGGTGGGAGATGGAAATGCAGATCATCAATGTTGGGAGCGGCCAGAGGACATGGATACACCAAGAACGCTTTACAAGATTAGTGCTAGTTCTCCAGGAACCGAAGCTGCAGCTGACTATGCTGCTGCTCTTTCTGCTGCTTCCATTGCCTTCAGAAAAGTCGATTCTAGTTATTCCTCCAAACTATTAAGTCATTCAAAATCACTGTTTGATTTTGCTGACAAGTACAGAGGATCATACGGAGGTTCTTGCCCATTCTACTGCTCTTACTCAGGCTACCAGGATGAACTGTTATGGGCTGCCTCTTGGATATACAAAGCCAGTGGAGAAAGCAAGTACTTGAGCTACCTCTCAGGCAATCAAGGCTGGAGTCAGGTTGTTTGTGAGTTCAGTtgggataaaaaatttgttggaGCTCAGACATTAATGACAGAGGAATTCTATGGAGGGAAGAAGGAATTTTCCAAGTTTAGGAGTGACGCAGAGTCATTTATATGCGCAGTGATGCCAGGAAGTAGCTCCCTACAGATTAAGACAACGCCTGGTGGGCTTCTGTACACTAGAGACAGTAGTAACTTGCAATATACCACGAGCTCTACCATGGTTCTATTCTTATTCTCCAAAATCCTAACCAGAAGTCATATTGATAGAATCCAGTGTGGCTCTGCGCATTTTACACCAATGCAAATTCGAGCCTTCGCCAAAGCACAGGTGGACTACATACTTGGAAACAATCCGATGAAGATGTCATACATGGTAGGATTTGGAAGTAAATACCCAAGGCAATTACATCACAGAGCATTCGTGGGTGCTGTGTCTGCTTTGCTTGGCGAAACCAAGCTACACACGCTGCAATTTCCCCAGACTGATGGTCCCGTTGCACAAGTTAACAAGGCTGAAta 1352 0.4519 MGYKLVVCSLVLWCVLVGHNGLARMDNRLNDSDSGLAYDYGGALGKAIMFFEGQRSGKLPTSQRVNWRGDSALSDGKLENVNLIGGYYDSGDHVKFGWPMAFTVSLLSWAAVEYESEISSVNQLGYLSSAIRWGSDFLMHAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYKISASSPGTEAAADYAAALSAASIAFRKVDSSYSSKLLSHSKSLFDFADKYRGSYGGSCPFYCSYSGYQDELLWAASWIYKASGESKYLSYLSGNQGWSQVVCEFSWDKKFVGAQTLMTEEFYGGKKEFSKFRSDAESFICAVMPGSSSLQIKTTPGGLLYTRDSSNLQYTTSSTMVLFLFSKILTRSHIDRIQCGSAHFTPMQIRAFAKAQVDYILGNNPMKMSYMVGFGSKYPRQLHHRGSSIA 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02165 421 Pfam Glycosyl hydrolase family 9 40 420 IPR001701 GO:0004553|GO:0005975
Bva11g02165 421 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 390 416 IPR018221 -
Bva11g02165 421 SUPERFAMILY Six-hairpin glycosidases 38 420 IPR008928 GO:0005975
Bva11g02165 421 Gene3D - 36 421 IPR012341 GO:0005975
Bva11g02165 421 PANTHER ENDO-1,4-BETA-GLUCANASE 3 420 - -
Bva11g02165 421 PANTHER ENDOGLUCANASE 18-RELATED 3 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02165 Bva-Chr11 17723375 17725720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02165 37 420 Glycoside Hydrolase AT4G23560 71.875 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02165 - - gmx:547834 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02165 11 17723375 17725720 Bva11g02165 11 17723375 17725720 ECH