Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02143 ATGCTAGAGCCTGAGCTCTGTTCTTCTAGGATATTATCACCCTCTCGGGAGGAAAGTGGAGATGAGGAACTTTCTGTTCTGCCAAGGCATACCAAAGTTATTGTCACTGGGAACAACAGGACAAAGTCCGTATTGGTCGGTCTGCAAGGCGTGGTCAAGAAGGCTGTCGGCCTTGGAGGATGGCATTGGCTgGTCTTGAAAAATGGGGTTGAGGTTAAGCTGCAAAGAAATGCATTGAGTGTGCTAGAGCCCCCTACAGGAAATGAAGACGATGATCTTGATTTTGATAACTCTAGCAGCGGCTCTGATATCcatgaaaaagacaaagacTTCTCTAGTGGTATTGTTTTCCGCAAACTCAGCAAGCCAAGAGTTCGACACAGAAGGCCTTATGTTCAATCTCTTTCAGGAAAGTCTAGCAACCGTGGGAGTTACAGAGAAGTTAATTCCATTCTTGCACCTCAGACTAGGGTGAACCTAGCAAAGATAGGAATGAGCTCGTTATGGAGATATTGCAGACATTTTAACCTTGTCAGctacaattcaaatttatcaaggGAACAAATGGTTAATATCGTGAAGCACCATTTCGCTTTGCAgCTTAAAGTGGATGAGtttctcttcttcaaattCGATTTCATTCTTACGCTTCGGTCAAATCCTACATCGAAAAGgggAAAGACCAGGAGCAGCGATGGCAATTTCAGGTA 710 0.4099 MLEPELCSSRILSPSREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEPPTGNEDDDLDFDNSSSGSDIHEKDKDFSSGIVFRKLSKPRVRHRRPYVQSLSGKSSNRGSYREVNSILAPQTRVNLAKIGMSSLWRYCRHFNLVSYNSNLSREQMVNIVKHHFALQLKVDEFLFFKFDFILTLRSNPTSKRGKTRSSDGNFR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02143 236 MobiDBLite consensus disorder prediction 83 107 - -
Bva11g02143 236 PANTHER OS04G0166600 PROTEIN 1 214 - -
Bva11g02143 236 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 164 205 IPR025718 GO:0005515
Bva11g02143 236 PANTHER SAP30 1 214 IPR024145 -
Bva11g02143 236 Gene3D - 138 229 IPR038291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02143 Bva-Chr11 17630408 17637168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02143 - - qsu:111986061 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02143 11 17630408 17637168 Bva11g02143 11 17630408 17637168 ECH