Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02139 ATGGATTCCATTTTCCAACAGGATCGACCTGACATAATGGCAAAATATACATGTCGCATTGAGGGAGATAAATCACTGTATCCAGTGCTGTTGTCTAATGGAAACCTGATTGAACAAGGCGACTTGGAGAGCAAAGATGACACCTTTATCACCCGTTCGGGACGGAATGTGTCCCTAAGGATCTGGACCCCTGCTGAAGATGTACCCAAGACCGCACATGCTATGTGTTCTCTAAAGGAAGCTATGAAGTGGGACGAAGATGTTTTTGGTCTTGAATATGACCTGgatctttttaatattgtcGCTGTCCCAGATTTTAACATGGGAGCTATGGAGAATAAGAGTTTGAATATTTTTAATTCTAAGCTTGTCTTGGCATCTCCAGAAACTGCTTCAGACGCAGATTATGCTGCAATATTGGGAGTTATTGGCCATGACTATTTCCACAACTGGATTAGCAACAGGTTAGTCACCTGTCGAGACTGGTTCCAGCTTAGCCTGAAGGAAGGTCTCACTGTTTTTCTTTCCTCCGACATGGGGAGCCGTACTGTAAAGCTGATTGCTGATGATTCTGGTCCCGAGGCTCACCCTGTGCGACCACATTCGTATATCAAGATGGACAACTTCTACGCCGGTAAGTTTACTCATTTAAGTAATTCTGGTTG 665 0.4331 MLLLQGGKHCAVWEDPFKKPSYLFALVAGQLQSKDDTFITRSGRNVSLRIWTPAEDVPKTAHAMCSLKEAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHDYFHNWISNRVTCRDWFQLSLKEGLTVFRDQDSGPEAHPVRPHSYIKMDNFYAGKFTHLSNSG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02139 197 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 41 186 - -
Bva11g02139 197 PANTHER - 165 191 IPR012779 GO:0008270
Bva11g02139 197 PANTHER - 5 166 IPR012779 GO:0008270
Bva11g02139 197 Pfam Peptidase family M1 domain 66 171 IPR014782 GO:0008237|GO:0008270
Bva11g02139 197 Gene3D tricorn interacting facor f3 domain 3 31 IPR042097 -
Bva11g02139 197 PRINTS Membrane alanyl dipeptidase (M1) family signature 13 28 IPR001930 GO:0006508
Bva11g02139 197 PRINTS Membrane alanyl dipeptidase (M1) family signature 131 146 IPR001930 GO:0006508
Bva11g02139 197 PRINTS Membrane alanyl dipeptidase (M1) family signature 150 162 IPR001930 GO:0006508
Bva11g02139 197 PRINTS Membrane alanyl dipeptidase (M1) family signature 95 105 IPR001930 GO:0006508
Bva11g02139 197 PANTHER BNAC06G01820D PROTEIN 5 166 - -
Bva11g02139 197 Gene3D Neutral Protease Domain 2 117 166 IPR027268 -
Bva11g02139 197 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 5 29 IPR042097 -
Bva11g02139 197 Gene3D - 32 116 - -
Bva11g02139 197 PANTHER BNAC06G01820D PROTEIN 165 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02139 Bva-Chr11 17611463 17613423 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02139 K01256 - ming:122086445 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02139 11 17611463 17613423 Bva11g02139 11 17611463 17613423 ECH