Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02125 ATGTCCAAATGTAACAAATCACCTAAGGTTGATCAACATTCAATCAAATACAGGTTGAATCAACGTGGGGGGCCATTGTTGGATGATGTTGATCTTTCTTGTGTAGAATACACCCACACTCTTtcgaataaagaaaataagcattGCTACAAAAATTCGAATGTGAATTCCCCTGAGCTACTGAGCACATCTCAGCTTGTCTCTGCAATTGGACAGATATGGGATTCTGCAAGTCGCCCTCTTTTCCAATTCCACCCTAAGGAAAATTTGAATGAAGATGATGCAAGCTtccagaaagagaaaattctgGATAGCTTTGGTACGGAAAGAAATGGCGGGGCATATACTTCAACTGATGGTAACTACTTCCCAGTTAATCAGAGGGCTACTGGCTATGTTTCACACATGGTGCAGGCAAAATTAGATTTCCCTAAAGTAACACACAAGATGTTATTACTTGAATCTTTTAATGAAAGTCAATGCTATGTTCATTCTATATTCCAGAGAATTTTGCAGGCCAGTCCCTGTACTAACAGTTCGTATGACTTTTGGAAAGGAAAGGAGTTTGTGAGGCAGAAAATCTCATTTGGACCAGGAAAGACTTGTTGGATGAGTAAAAATGCTCCTGCTGGACTGAAGTGTTCAGTCAGGGTTGCTGAGCCCGATAACACGAGTATTGCTACTTCGGCGGCTGGGGACTGCATTTCAGTAGATACAACCAAACCTGCATTGGCTAATGAGGGTAATGAGTGCAATCTTGATTTAACTATCTATGACTGTCTAGCATTGTTTAATGATGCGATGCTGGACCTCAGAAAATCTACCTCTCTGAGTTCCAACCATCTGCTTAGACCTCTGCATGAAACCAAGACGGATATTGGTGTTAGTCAGACCTTATATTCAAGTATCTGTGCAGACTATCGTATAAAATCCTTAGTAACCCGTGATGGTGCTTTCGATGCATGCCAACATAGGAGTGATGATAATGAATTGCTGGAGACTGAAAAAAGGCATTTCTCCGATACTATTACTGATGATCAGTCAAAAATCGAGTTCTCCTCATCCAATCAGAAGCCCCATTTCTCCCTTGCCAAGCAAGAACATGCATTTGCTGGGGCGTTGGCTGGTATATGTGTCAGCCTTTGTCTACATCCTGTTGACACGATTAAGACAGTCATTCAATCACGCCGTGCAGAACGGAAGTCCATCTTTTATATTGGCAAATCAATTGTTTCTGACCGAGGTTTGACGGGACTTTATCGAGGAATTACAACCAACATCACATGTTCCGCTCCGATTTCTGCAGTTTATACTTTCACCTATGAATCAGTTAAAACAGCCTTGCTTCCTTATCTTCCTATGGAGTATCACTCACTTGCCCATTGTGTGGCAGGTGGTTGTGCAAGCATTACcacctctttcatttttactccTAGTGAGCGGATAAAGCTGCAGATGCAAGTTGGGCCTCACTATCGCAACTGCTGGGATGCATTGGTTGGAATCATCAGGAAGGATGGTTTTGCTTCACTATATGCCGGTTGGGGAGCTGTACTTTGCAGGAATATTCCACATTCAATTATCAAGTTTTACATGTACGAAAGCTTGAAGCAAATGATGTCATCATTGCCATCTAGTATACGACCTAACACATTAGATACTCTAGTTTGTGGTGGATTAGCTGGATGTACTGCTGCTTTATTTACAACTCCTTTTGATGTGATCAAGACAAGATTACAGACACGGATCCCCGGATCTCTAAATCAACACGATAGTGTATTTCACGGGCTTTTCAAAATAGGAAAGCATGAAGGTTTTAGGGGCTTGTACAGGGGATTGATTCCAAGGTTGATTATGTACATGTCTCAAGGAGCACTATTCTTTACTTCATATGAACTTTCCAAAGGGCTATTTTCTTTACAAGCGTCAAATCCCCATTCTATAAAAGCCGAGGATAATGATTA 1964 0.4033 MSKCNKSPKVDQHSIKYRLNQRGGPLLDDVDLSCVEYTHTLSNKENKHCYKNSNVNSPELLSTSQLVSAIGQIWDSASRPLFQFHPKENLNEDDASFQKEKILDSFGTERNGGAYTSTDGNYFPVNQRATGYVSHMVQAKLDFPKVTHKMLLLESFNESQCYVHSIFQRILQASPCTNSSYDFWKGKEFVRQKISFGPGKTCWMSKNAPAGLKCSVRVAEPDNTSIATSAAGDCISVDTTKPALANEGNECNLDLTIYDCLALFNDAMLDLRKSTSLSSNHLLRPLHETKTDIGVSQTLYSSICADYRIKSLVTRDGAFDACQHRSDDNELLETEKRHFSDTITDDQSKIEFSSSNQKPHFSLAKQEHAFAGALAGICVSLCLHPVDTIKTVIQSRRAERKSIFYIGKSIVSDRGLTGLYRGITTNITCSAPISAVYTFTYESVKTALLPYLPMEYHSLAHCVAGGCASITTSFIFTPSERIKLQMQVGPHYRNCWDALVGIIRKDGFASLYAGWGAVLCRNIPHSIIKFYMYESLKQMMSSLPSSIRPNTLDTLVCGGLAGCTAALFTTPFDVIKTRLQTRIPGSLNQHDSVFHGLFKIGKHEGFRGLYRGLIPRLIMYMSQGALFFTSYELSKGLFSLQASNPHSIKAEDND 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02125 654 PRINTS Mitochondrial carrier protein signature 474 488 IPR002067 GO:0055085
Bva11g02125 654 PRINTS Mitochondrial carrier protein signature 564 582 IPR002067 GO:0055085
Bva11g02125 654 PRINTS Mitochondrial carrier protein signature 610 628 IPR002067 GO:0055085
Bva11g02125 654 PRINTS Mitochondrial carrier protein signature 514 534 IPR002067 GO:0055085
Bva11g02125 654 ProSiteProfiles Solute carrier (Solcar) repeat profile. 549 637 IPR018108 -
Bva11g02125 654 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 648 - -
Bva11g02125 654 Pfam Mitochondrial carrier protein 458 541 IPR018108 -
Bva11g02125 654 Pfam Mitochondrial carrier protein 367 448 IPR018108 -
Bva11g02125 654 Pfam Mitochondrial carrier protein 551 639 IPR018108 -
Bva11g02125 654 Gene3D Mitochondrial carrier domain 337 455 IPR023395 -
Bva11g02125 654 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 648 - -
Bva11g02125 654 Gene3D Mitochondrial carrier domain 456 650 IPR023395 -
Bva11g02125 654 ProSiteProfiles Solute carrier (Solcar) repeat profile. 456 539 IPR018108 -
Bva11g02125 654 SUPERFAMILY Mitochondrial carrier 367 632 IPR023395 -
Bva11g02125 654 ProSiteProfiles Solute carrier (Solcar) repeat profile. 363 447 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02125 Bva-Chr11 17562075 17566540 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02125 367 635 EF-hand Containing Proteins AT2G35800 30.370 1.52e-33 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02125 - - gmx:100812271 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02125 11 17562075 17566540 Bva11g02125 11 17562075 17566540 ECH