Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02122 ATGGGGAATCAAAAGTTCGCGCAGGTCTCCACCAGTGACGATGAAGACGAGGCACCACCACGCccgcagcagcagcaacaacaacaacaacaacaacaatctTCGGCTTCGGAAGATAAGCTGTCGAAGCTGCGTAAGAGGAAGAGGATAAAGCTTCAAGCGGAAGAAGATGAGGACGTGGcggaaaacaaaaataagaagatgaagaagcagAAAGATAATGAAGAGGAAGGGTCGCTGGCTGGTGACGAAGAGGAACCGCCTCAAGAGGACGCTAAGCCGATTGGTGATCCTATTAGGGTTTCgggaaaaggaagagggagGAGGAAGCATTACGAGTCCTTCGAGTTCGATGGGAACCAATACGTACTTGAGGATCCTGTACTTCTAGTGCCCGAGGATAAAGACCAAAAGCCATATGTTGCGATTATTAAGGACATTACACAGTCCCAAAATGGGAGCATGATGGTGACAGGGCAGTGGTTTTATCGTCCTGAggaagcagaaagaaaagGCGGTGGAAGCTGGCAATCAAATGATACAAGGGAGCTGTTTTACAGTTTCCATCGGGACGAGGTTCCTGCAGAATCTGTTATGCACAAGTGTGTAGTGCATTTTATTCCCAAACACAAACAGCTTCCAAATCGTAAACAGCATCCTGGGTTTATTGTTCAAAAGGTTTATGACACTGTGGAAAGGAAACTCTGGAAGCTAACTGATAAGGACTATGCAGATAACAAACAGCAAGAAATTGATGAGCTTGTCCAGAAAACTAAACAACGTTTGGGTGAGCTACCTGACATTGAGCCTGAAGAAGCCCCTACTGATCAGGAAgatcaaatgaagaaacaaagaagcTTCAGGAGAAAGAACATATCACCTCTTGATGTTTCAAGGGAGGAGGAAGCTGCTCCCAAGATCGACCAACATCTGAAGCCTGAAACGCCAGGAAGTTGTGTAAATAATGCGTCAGAGCATTATCgcatattagtaaatttcAATGTACTAACTGGAGATACCCATCGTGACAAATGTTTGGAGAAGTTGCTTCAAAGCATTCAGTATGTGTGTAATTCTGATGATGACACACAGAAGGAGGAGAGAGGCAGGGGCAACTCTGATGCCATCAATAATGGAAACAATCATGGTTCCAAGTCTTTGACATGGCCAGATGCTGCTGTTCCGGCCATAGCTGCCTTGGAAAAAGCTTCGCATGATGCTTTTCCCTTGGATTATCAGAAATATAACCAGAAGTTACGGCAACTGATATTTAATCTCAAGAACAATGCAGTGCTAGCACGTCGACTATTAAATGGGGAGTTGGaaccttcaaaaatattaaatatgtctCCCACAGAATTAAAGGAGGGTTTGACTGCTGAGGAAATAGCAAAGAAGGAGCCTGACGAGAAGCAGCACATGCAGATGACAGATGCTCGCTGCTCAAGATGCACGGAGGGTAAGGTTGGCGTGAAGGATATTATCCATGCAGGACATGGTGACCGATACCAgTTGGAATGTATGGCCTGTGGTAATTCCTGGTATGCTTCTCGGGATGCGGTGTCTGTCCTGACAGTAGATGCACCAGATTCATCCAGAAATGTAGGCACGGCACCTTGGGCCACTGCCAAATTTGAAGATGTTGAAAAGAAACTGTTGAGTCCCCGTGAATCCGACAAGTCAGGCAACGACGTCTTTAAGAAAACAAGTGAAGCATATATGCCTGTCTTGGATACTCGGAAATCATTTGGCAAGGCCAGGAAAGATGATGACAATAAAGTTACAAGACACGTTGAATG 1799 0.4152 MGNQKFAQVSTSDDEDEAPPRPQQQQQQQQQQQSSASEDKLSKLRKRKRIKLQAEEDEDVAENKNKKMKKQKDNEEEGSLAGDEEEPPQEDAKPIGDPIRVSGKGRGRRKHYESFEFDGNQYVLEDPVLLVPEDKDQKPYVAIIKDITQSQNGSMMVTGQWFYRPEEAERKGGGSWQSNDTRELFYSFHRDEVPAESVMHKCVVHFIPKHKQLPNRKQHPGFIVQKVYDTVERKLWKLTDKDYADNKQQEIDELVQKTKQRLGELPDIEPEEAPTDQEDQMKKQRSFRRKNISPLDVSREEEAAPKIDQHLKPETPGSCVNNASEHYRILVNFNVLTGDTHRDKCLEKLLQSIQYVCNSDDDTQKEERGRGNSDAINNGNNHGSKSLTWPDAAVPAIAALEKASHDAFPLDYQKYNQKLRQLIFNLKNNAVLARRLLNGELEPSKILNMSPTELKEGLTAEEIAKKEPDEKQHMQMTDARCSRCTEGKVGVKDIIHAGHGDRYQLECMACGNSWYASRDAVSVLTVDAPDSSRNVGTAPWATAKFEDVEKKLLSPRESDKSGNDVFKKTSEAYMPVLDTRKSFGKARKDDDNKVTRHVE 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02122 599 CDD BAH_plant_3 102 248 - -
Bva11g02122 599 SMART BAH_4 120 239 IPR001025 GO:0003682
Bva11g02122 599 SMART mid_6 339 464 IPR003618 GO:0006351
Bva11g02122 599 MobiDBLite consensus disorder prediction 361 387 - -
Bva11g02122 599 MobiDBLite consensus disorder prediction 1 107 - -
Bva11g02122 599 MobiDBLite consensus disorder prediction 262 315 - -
Bva11g02122 599 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 593 - -
Bva11g02122 599 SUPERFAMILY Elongation factor TFIIS domain 2 335 455 IPR036575 GO:0006351
Bva11g02122 599 MobiDBLite consensus disorder prediction 39 77 - -
Bva11g02122 599 Pfam BAH domain 121 237 IPR001025 GO:0003682
Bva11g02122 599 Coils Coil 51 78 - -
Bva11g02122 599 MobiDBLite consensus disorder prediction 275 309 - -
Bva11g02122 599 MobiDBLite consensus disorder prediction 21 38 - -
Bva11g02122 599 Coils Coil 27 47 - -
Bva11g02122 599 Gene3D - 87 257 IPR043151 -
Bva11g02122 599 ProSiteProfiles TFIIS central domain profile. 341 482 IPR003618 GO:0006351
Bva11g02122 599 Pfam Transcription factor S-II (TFIIS), central domain 337 473 IPR003618 GO:0006351
Bva11g02122 599 MobiDBLite consensus disorder prediction 373 387 - -
Bva11g02122 599 ProSiteProfiles BAH domain profile. 120 239 IPR001025 GO:0003682
Bva11g02122 599 Gene3D - 321 456 IPR036575 GO:0006351
Bva11g02122 599 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02122 Bva-Chr11 17552081 17556720 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02122 - - gmx:100787670 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02122 11 17552081 17556720 Bva11g02122 11 17552081 17556720 ECH