Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02120 ATGGTTCTGCTTTCCAGGACTGGTTCATCGTACTGTATGCGCAGTGAGATAATACGATATAAAGCAGGGAACAATGCAGTCATTAGCACAAGACACAAGTTTGATGCGTTCAATGTAAAGAAAACATGTATTGGTTTCTCTTCCTCAGAGAAGAGGCTTTTTGCTGTAATTGGATGTAAACGGGGCCATAAAGTGATCGTCGCTGCCAGTCCTCCTACAGAAGATGCTGTAGTTGTTACTGAGCCACTTACAGAAAGGGATCTTGTGGATTATCTTGCCTCTGGTTGTAAGCCTAAGGAAAAATGGAGAATTGGTACAGAACATGAGAAATTTGGTTTTGAGTTAGAAAGTCTACTTCCTATGAAGTACGAGCAGATAGCAGAGTTACTTAATGGCATTGCTGAGAGATTTGACTGGGATAAAGTAATGGAAGGTGATAAAATTATTGGACTCAAACAGGGTAAGCAGAGCATATCGTTAGAACCTGGTGGTCAGTTTGAGCTTAGTGGTGCCCCTCTTGAGACCCTGCATCAGACTTGTGCGGAAGTCAACTCACACCTCTATCAGGTTAAAGCTGTTGCTGAGGAAATGGGAATTGGATTTCTGGGGATTGGTTTCCAACCAAAGTGGGGACTCAGAGATATACCTATGATGCCAAAGGGAAGATATGAGATTATGAGGAATTACATGCCCAAAGTGGGTTCTCTTGGACTAGACATGATGTTCAGGACATGCACTGTACAGGTCAATTTAGACTTCAGTTCTGAAACTGACATGATCAGGAAATTCCGTGCTGGTCTAGCTTTGCAGCCTATAGCAACAGCTTTATTTGCAAATTCACCCTTCACAGAAGGGAAGCCAAATGGTTTTGTCAGTATGAGAAGCCAAATTTGGACTGATACTGATAAGGACCGTACAGGCATGCTGCCCTTTGTTTTTGATAACACCTTTGGGTTTGAGCAGTATGTTGATTATGCTCTTGATGTCCCAATGTATTTCGTCTAccgaaaaaagaattatatcgACTGTACTGGAATGACCTTCAGGGACTTTATGGCAGGAAAGCTTCCTTGTATTCCTGGCGAATTCCCAACCCTTAATGACTGGGAGAATCATTTGACAACAATATTTCCTGAGGTCAGGctgaagagatatttggagATGAGAGGTGCTGATGGAGGGCCTTGGAGAAGGTTATGTGCTTTACCAGCATTTTGGGTAGGCTTATTGTATGACGAAGTTTCTCTACAAAATGTTTTAGACATGACAACTGACTGGACCgcagaagaaagacaaatgcTCAGGAATaagGTTCCCAGAACTGGCCTAAAGACGCCATTCCGGGATGGTTTGCTGAAACATGTTGCCGAAGATGTTCTAAAGTTGGCAAAGGAGGGTTTGGAAAGAAGAGGGTTTAAAGAATCGGGATTCTTGAATGAGGTAGCTGAGGTGGTTAGAACAGGTGTTACACCAGCTGAAAAGCTTTTGGAATTGTATCATGGAAAGTGGGGACAATCCGTAGATCCTGTATTTGAGGAACTACTATATTA 1550 0.411 MVLLSRTGSSYCMRSEIIRYKAGNNAVISTRHKFDAFNVKKTCIGFSSSEKRLFAVIGCKRGHKVIVAASPPTEDAVVVTEPLTERDLVDYLASGCKPKEKWRIGTEHEKFGFELESLLPMKYEQIAELLNGIAERFDWDKVMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLRDIPMMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSETDMIRKFRAGLALQPIATALFANSPFTEGKPNGFVSMRSQIWTDTDKDRTGMLPFVFDNTFGFEQYVDYALDVPMYFVYRKKNYIDCTGMTFRDFMAGKLPCIPGEFPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEVSLQNVLDMTTDWTAEERQMLRNKVPRTGLKTPFRDGLLKHVAEDVLKLAKEGLERRGFKESGFLNEVAEVVRTGVTPAEKLLELYHGKWGQSVDPVFEELLY 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02120 516 Pfam Glutamate-cysteine ligase family 2(GCS2) 134 426 IPR006336 GO:0004357|GO:0042398
Bva11g02120 516 SUPERFAMILY Glutamine synthetase/guanido kinase 94 514 IPR014746 GO:0003824
Bva11g02120 516 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 82 516 IPR011556 GO:0004357|GO:0006750
Bva11g02120 516 PIRSF GCL 68 516 IPR035434 GO:0004357|GO:0006750
Bva11g02120 516 PANTHER GLUTAMATE--CYSTEINE LIGASE 1 516 - -
Bva11g02120 516 Gene3D - 68 516 - -
Bva11g02120 516 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 1 516 IPR035434 GO:0004357|GO:0006750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02120 Bva-Chr11 17540100 17545148 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02120 K01919 - qsu:111985770 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02120 11 17540100 17545148 Bva11g02120 11 17540100 17545148 ECH