Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02116 ATGAGGTACGTGGAGCCGTTTACCTTATTTCGTGATTTGCTAAAGGCAAATGCACCGGCGAAAGGAAGGTTGCTTGGTTTGGATGTTGGTCATAAATATATTGGTCTAGCTGTTTCGGACTTTAAGAAGGAAATTGCATCACCTCTCAGTGTTTTGGtcagaaaaaagacaaatattgATGAAATGGCATGTGATTTTGAGAATCTGATCTCTGAACTTTCTTTGAAGGGCTTCATCGTCGGTTACCCTTATGATAGAATGCGGGTTTCTCCTGATGCTATACAAGTCAAGGTTTTCATTGATGACCTTTGTAAAACTGAAAAGTTTCAAGGTTTACCGTATACATTTTGGAGTGAGCGCTTCACATCAAAGAACGAGGAATTGTATTTAAAGGATTTGCAGTTGCATCCAGTTCATTACAAGACTATAATTGATAAGTTTGCTGCTGTTGGAATACTTCAGGGATACCTGGATCATGTTAACAAAAAGTTGAAGTCACAACCAACAGAAAGACGCATAAGTCGGAAGCCACTTTTGGAAACTTATGAATGCAATGAGAGACTGGTGGAAGATACAGTTTACTTTCCTTATAATCCAATTATGTATTGCATAGCTGAAACAATTTGTTCTCTAATTTGCTA 641 0.3697 MRYVEPFTLFRDLLKANAPAKGRLLGLDVGHKYIGLAVSDFKKEIASPLSVLVRKKTNIDEMACDFENLISELSLKGFIVGYPYDRMRVSPDAIQVKVFIDDLCKTEKFQGLPYTFWSERFTSKNEELYLKDLQLHPVHYKTIIDKFAAVGILQGYLDHVNKKLKSQPTE 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02116 170 Gene3D - 21 167 IPR037027 GO:0006139
Bva11g02116 170 CDD YqgF 24 158 IPR005227 GO:0006364
Bva11g02116 170 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 167 - -
Bva11g02116 170 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 167 IPR005227 GO:0006364
Bva11g02116 170 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 25 158 IPR005227 GO:0006364
Bva11g02116 170 Hamap Putative pre-16S rRNA nuclease [yqgF]. 22 161 IPR005227 GO:0006364
Bva11g02116 170 SUPERFAMILY Ribonuclease H-like 22 161 IPR012337 -
Bva11g02116 170 SMART rnase_8s 22 126 IPR006641 GO:0006139
Bva11g02116 170 Pfam Holliday junction resolvase 23 158 IPR005227 GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02116 - - qsu:112036451 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02116 11 17508565 17512193 Bva11g02116 11 17508565 17512193 ECH