Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02096 ATGTGCACCAGCCAATTGAATATGGAAAGCACTTGCCTGGAAAATCCTCAAGCAACCAATGGGCCCATCAGCAGGGACACAATTTGCAATTCTGAGCAAATTATTGTGAAAGCAAATGAACATCCTGAATGGTTACCTGCTGGGTGGACTGTGGATGTCAGAACTCGAAAAAGTGGTGCACATATGGGATCCGAGTATAAGTGTTACATTGAACCATCAAATGGGCACAGATTCTACTCCAAGCCAGAGGTGTTACGGTATCTTGAAACTTTAAAGGGAAACAGCTGCACCTCcaagaaggagaagagatgCACCAATTTGTACTCTCCAAGCAAAGATGTTGTTCAGACGACTACAGTGGAGGATCTACCACCTGGGTGGATGAAAGAGGTCAGGGTTAGGAAGGGCAATGGCAACAGGAAAGACCCGTATTATATAGATCCAGATAGTGGTTATGTATTCCGTTCCAAGAAGGATGCATTGCGCTATCTCGAATCTGGAGATGTAAGTACCTGTATCTTCAAGccatataaaagagaaatgcaAGATGAAGACATGTTCACTGCGTCATCCACAGCCAAAAAACAGAAACTAACACAGTCTGCAACCCGACGGCAGCTTTTTGTAGGCAAAGAAATATCTGATAAAAGTAGCTCTGAGTTGCCAGATGCGGTTAGTTCAAAAAGTATGGCAGATATGAAGGTGTCTGCTGAAATGAGTGATGAAATTGTTCTCAACATGCATCCACAAGGGGATGTAGCTTCTGACCCTCCTGAAATGAGTGAAAAATCCAATCCAGCTGAAGTTCAAGAGAAGGATTGCATTGTGAATGAGGAGGAGAATGGTAATATAAAGAATCACAGTAATCCCAGCATATCTAGAAACAACAAAGAATTGAGTGTTCATCACCGGTTCTCGAAACGACTTGCTGGGATTGGACCTATTGAGGTGGCTGGCACTGTGGGCCAAGAACAGCCCCTTCAAGCACCAAATAGATACTTGAGGAAAAGTAGAAGAACCACTAATGCTGATTTTGCTAATAAATCGTCTCAGCAGGTCAATGTTGTCTCAGAACTTGAACACGTTCAAAATGCTTCTTGTATGAACATGCCAATGCTAGGTGAATCGCTAAGCAAATCTGACAAGCCTTCTGAAGACCAAGGAGTTTCCAGAGAGCAACATCAACTGGAAACAGAGAAGATAGATGACAAAAAGCCAGAACAACTTCATCTTTCTCTATCTCAGTATTCTAGTTCACCAGGCGTCAATGTTGCAATGAAGACCATCATAACTGGTGAATCCCCAGTTCTGGATAATCCACATACTGGTCAGAGTTTGGCTTCTGAAGCTTCTGCCCTAAAAGGAAACAAGTTACATATGAGTAAGATTGGGAAGACTGGTGCTCAGAAAATTCATGCTCACtcaaataaatcaagtaataAGAAAGACCAGCACATACCTCGCCGGGCTTCAAAACGACTTGCTGGATTTGAACCTGAGCTGATGAACAACTCTATGTACAGTGAAAAACCTCCTGAATATAAGAGCAGAAAGTCTAAAAATGAAGTCAACACAGTAGCTCGGCAGAGTGAGGATGGGGCAAATAAAGATCTTGCAGATCATGATCCTGCCAACGTAAGTCCATTAATAAATGGAGAGTCTTCAAGAAAAAGCCGAAAGTCTCCTAACCTACCAGATATTACTGACAAGCAAGTTGAAAAGGCTGGAGATGACGAAATTTATGATGAAATTTCGGCATCTCCGCTATCCTTCGCATTCCACTATTCGTGGTCAGACCCATGCTTAGAATTTGCAATTAAGACCCTCACAGGAGTGTTACCAATTGAGGATACAGTTAAAAATGACCCTAATTTGGTCTCTGAAACTGGTGTTATTGAAGAAACTAAATTGTCTGACAGGGGTACAGAAAGCACCAGTGATAGAAATTCACAGGTAAATTCGAAGAAacacaagaacaagaaagagcTTAGATTGCCACGCAGGCTGTCAAAGCGACTTGCTGGCCATGAACCTGAGCTAGTGCCTGCTGAAAGACCTCTTGAATACGCTGGCAGAAAATCGTACAAAGATATACCAACTGCGAGTGTGCGTTTGAACAGTGGAGCATCTCAGCATCTTGACGCTAGCAATGAAGCAGAGCGTATTATTCATGCATCTGATAGTCCTAAAGCAATTGGAGTGCATGGAGAGTCATCGAACAACAGTAATGAAGTCCAAACTATGCCTGAGGAGCAACTGCTGAAGCCTGAAGCTGAAAAGATTGGTGGTCAGAGTTCAAATGTGAATTTGAATGATGAAGCGTCTAAGCATCTTGGTACTAGCAAAGAAACAGAGTATAGCGTACAGAAGCCTGAAGCTGAAAAGATTGGTGATCAGAGGTCAGAGCCACAGCTGTCCCTCCCGTTTGGGGACTCTTGGTCAGATGATCCATGCCTAGAATTTGCATTCATGACTCTTACAGGGGCATTACCTGTGGAAGATACTGCTGACGTTTTGCCTGTAATGTCTCCCAGTGTTAGTGCCCCGCCAAATCAGGATTTGCTTGAGAGTGTGGTGGAGAAGAGCATCGACGAAGTTCTTGATATCTCGAATCAATCCAAGAACAAGACAGAACTCAGTTTAGTTTGGGAGCCTTCAAAACGGAACCTGGGGCAACCTGAGTTAAGGACTGACTCAGAGTCTTGTGAACTTGCTTCTAACTTGGCAACTGGACAGTCCTACTGTGGTGAAGCCTATAGTATAACAAGGAATTTGGATGAAGGAAATTCCCTAAATACTGAATGTGGGAATATGACCCAACTTAGTCATCATTCTAGAAATATGGACATGTTTAGATATGAAGAGCAGCCCATAAAGAAAATTGGACAGGTTCTTGAGGGTGATGCTGTTCCAGCAGAGCAATCACAACTTGAAACTCTAAACCATGAGAACCCTGAATCTCGTTTATGCGCCCCATTTATGGATTCTTGGTCAGACCCATGTCTACAATTCGCATTTAAGACTCTTACAGGAGCAATACCGGTAGAGGGAAATTTAGCGATGCAACACTGTTTCCAGGGACCTGCCAATTATCATGGCCAGGGCCAGAGGGATGGTGGCTCGAAATTGCCAGATTTTGTATCTTCCAGGTTTCCTCAAAGTGATATCTCATCCCACCATCATTTGGGAGAGAAGTCCACTCCGGGGCAGCAGCCATCAATGAGTTCTTCATTCCTACCTCTGGAAAATGTGAGCATCCATGATTGTTCTGGACAGAAACCACACCCTAATTACAGTAAGTTTTA 3305 0.4248 MCTSQLNMESTCLENPQATNGPISRDTICNSEQIIVKANEHPEWLPAGWTVDVRTRKSGAHMGSEYKCYIEPSNGHRFYSKPEVLRYLETLKGNSCTSKKEKRCTNLYSPSKDVVQTTTVEDLPPGWMKEVRVRKGNGNRKDPYYIDPDSGYVFRSKKDALRYLESGDVSTCIFKPYKREMQDEDMFTASSTAKKQKLTQSATRRQLFVGKEISDKSSSELPDAVSSKSMADMKVSAEMSDEIVLNMHPQGDVASDPPEMSEKSNPAEVQEKDCIVNEEENGNIKNHSNPSISRNNKELSVHHRFSKRLAGIGPIEVAGTVGQEQPLQAPNRYLRKSRRTTNADFANKSSQQVNVVSELEHVQNASCMNMPMLGESLSKSDKPSEDQGVSREQHQLETEKIDDKKPEQLHLSLSQYSSSPGVNVAMKTIITGESPVLDNPHTGQSLASEASALKGNKLHMSKIGKTGAQKIHAHSNKSSNKKDQHIPRRASKRLAGFEPELMNNSMYSEKPPEYKSRKSKNEVNTVARQSEDGANKDLADHDPANVSPLINGESSRKSRKSPNLPDITDKQVEKAGDDEIYDEISASPLSFAFHYSWSDPCLEFAIKTLTGVLPIEDTVKNDPNLVSETGVIEETKLSDRGTESTSDRNSQVNSKKHKNKKELRLPRRLSKRLAGHEPELVPAERPLEYAGRKSYKDIPTASVRLNSGASQHLDASNEAERIIHASDSPKAIGVHGESSNNSNEVQTMPEEQLLKPEAEKIGGQSSNVNLNDEASKHLGTSKETEYSVQKPEAEKIGDQRSEPQLSLPFGDSWSDDPCLEFAFMTLTGALPVEDTADVLPVMSPSVSAPPNQDLLESVVEKSIDEVLDISNQSKNKTELSLVWEPSKRNLGQPELRTDSESCELASNLATGQSYCGEAYSITRNLDEGNSLNTECGNMTQLSHHSRNMDMFRYEEQPIKKIGQVLEGDAVPAEQSQLETLNHENPESRLCAPFMDSWSDPCLQFAFKTLTGAIPVEGNLAMQHCFQGPANYHGQGQRDGGSKLPDFVSSRFPQSDISSHHHLGEKSTPGQQPSMSSSFLPLENVSIHDCSGQKPHPNYSKF 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02096 1101 Pfam Methyl-CpG binding domain 123 168 IPR001739 GO:0003677
Bva11g02096 1101 Pfam Methyl-CpG binding domain 40 93 IPR001739 GO:0003677
Bva11g02096 1101 SUPERFAMILY DNA-binding domain 122 169 IPR016177 GO:0003677
Bva11g02096 1101 MobiDBLite consensus disorder prediction 379 408 - -
Bva11g02096 1101 MobiDBLite consensus disorder prediction 511 525 - -
Bva11g02096 1101 Gene3D - 117 184 - -
Bva11g02096 1101 SUPERFAMILY DNA-binding domain 41 96 IPR016177 GO:0003677
Bva11g02096 1101 Gene3D - 14 116 - -
Bva11g02096 1101 PANTHER OS04G0193200 PROTEIN 628 836 - -
Bva11g02096 1101 PANTHER OS04G0193200 PROTEIN 979 1098 - -
Bva11g02096 1101 PANTHER OS04G0193200 PROTEIN 8 442 - -
Bva11g02096 1101 MobiDBLite consensus disorder prediction 465 572 - -
Bva11g02096 1101 MobiDBLite consensus disorder prediction 1031 1077 - -
Bva11g02096 1101 MobiDBLite consensus disorder prediction 1063 1077 - -
Bva11g02096 1101 MobiDBLite consensus disorder prediction 632 665 - -
Bva11g02096 1101 PANTHER OS04G0193200 PROTEIN 456 621 - -
Bva11g02096 1101 PANTHER OS04G0193200 PROTEIN 628 836 IPR038945 -
Bva11g02096 1101 MobiDBLite consensus disorder prediction 265 280 - -
Bva11g02096 1101 MobiDBLite consensus disorder prediction 281 296 - -
Bva11g02096 1101 PANTHER OS04G0193200 PROTEIN 979 1098 IPR038945 -
Bva11g02096 1101 PANTHER OS04G0193200 PROTEIN 8 442 IPR038945 -
Bva11g02096 1101 PANTHER OS04G0193200 PROTEIN 456 621 IPR038945 -
Bva11g02096 1101 MobiDBLite consensus disorder prediction 476 495 - -
Bva11g02096 1101 MobiDBLite consensus disorder prediction 778 807 - -
Bva11g02096 1101 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 35 112 IPR001739 GO:0003677
Bva11g02096 1101 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 113 184 IPR001739 GO:0003677
Bva11g02096 1101 MobiDBLite consensus disorder prediction 249 300 - -
Bva11g02096 1101 MobiDBLite consensus disorder prediction 372 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02096 Bva-Chr11 17421092 17427534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02096 - - aprc:113854032 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02096 11 17421092 17427534 Bva11g02096 11 17421092 17427534 ECH