Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02094 ATGAGTTACTCAGGCAAACTCTCACTTTATTCCCTACTTCTGCTCAGTTTGTTCGTGATCTCAAGTCATGCAGCCAATTTTGAGATAGTGAACAATTGTCCATACACTGTTTGGGCTGCTGCCAGCCCCGGCGGTGGTCGCCGCCTGGACCGTGGCCAGACATGGAACTTGTGGGTGGCACCGGGCACTGCTATGGCCCGTATCTGGGGCCGTACCGGTTGCAATTTCGATGGCAGCGGGCATGGTCGTTGCCAGACTGGGGACTGCACCGGTGGACTACAATGCACGGGTTGGGGTGTGCCTCCAAACACCCTGGCCGAGTATGCCTTAAATCAATTCGGCAACTTGGATTTCTACGACATCTCATTGGTGGATGGTTTCAATATTCCCATGGATTTCTACCCTCTTAATGGTGGGTGTCATAAAATCAGCTGCACAGCAGACATCAACGGGCAGTGCCCTAATCAACTGAGAACAGCAGGTGGGTGTAACAACCCATGCACTGTGTTTAAGACCAATGAATATTGCTGTACCAATGGACAAGGAAGCTGCGGACCCACTAATTTCTCGAGGTTCTTCAAAGATAGGTGCCGAGATTCCTACAGCTACCCTCAAGATGATCCATCAAGCACATTCACATGCCCAGCTGGTTCTAACTACAAAGTTGTATTTTGCCCATTAGGATCAACTCAATATTTCCCACTTGAGATGCCGGGAAGCGTGACCGATCACTG 734 0.5027 MSYSGKLSLYSLLLLSLFVISSHAANFEIVNNCPYTVWAAASPGGGRRLDRGQTWNLWVAPGTAMARIWGRTGCNFDGSGHGRCQTGDCTGGLQCTGWGVPPNTLAEYALNQFGNLDFYDISLVDGFNIPMDFYPLNGGCHKISCTADINGQCPNQLRTAGGCNNPCTVFKTNEYCCTNGQGSCGPTNFSRFFKDRCRDSYSYPQDDPSSTFTCPAGSNYKVVFCPLGSTQYFPLEMPGSVTDH 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02094 244 ProSitePatterns Thaumatin family signature. 80 95 IPR017949 -
Bva11g02094 244 SMART tha2 27 226 IPR001938 -
Bva11g02094 244 Gene3D Thaumatin 24 227 IPR037176 -
Bva11g02094 244 PANTHER PATHOGENESIS-RELATED PROTEIN R MINOR FORM 12 226 - -
Bva11g02094 244 PIRSF PR5 1 242 IPR001938 -
Bva11g02094 244 CDD TLP-P 27 226 - -
Bva11g02094 244 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Bva11g02094 244 PRINTS Pathogenesis-related protein signature 67 78 IPR001938 -
Bva11g02094 244 PRINTS Pathogenesis-related protein signature 45 54 IPR001938 -
Bva11g02094 244 PRINTS Pathogenesis-related protein signature 80 109 IPR001938 -
Bva11g02094 244 PRINTS Pathogenesis-related protein signature 117 133 IPR001938 -
Bva11g02094 244 PRINTS Pathogenesis-related protein signature 216 225 IPR001938 -
Bva11g02094 244 ProSiteProfiles Thaumatin family profile. 24 226 IPR001938 -
Bva11g02094 244 PANTHER OS03G0233200 PROTEIN 12 226 IPR001938 -
Bva11g02094 244 SUPERFAMILY Osmotin, thaumatin-like protein 26 226 IPR037176 -
Bva11g02094 244 Pfam Thaumatin family 31 226 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02094 Bva-Chr11 17416249 17417234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02094 7 226 Receptor kinase-like Gene Family AT5G38280 35.918 2.30e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02094 - - gmx:100240704 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02094 11 17416249 17417234 Bva11g02094 11 17416249 17417234 ECH