Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02062 ATGGGTTTTCCAGCTAGCGGTGCCTCAGCCGACAAGCCCCTCAAGTTCCTGATCTACGGCCGCACCGGCTGGATTGGTGGCCTTCTTGGCAAACTCTGTGAATCACAGGGTATCGACTACGCTTATGGATCCGGCCGCCTCGAGAACCGCTCTTCCTTGGAAGCCGACATAGCTACCGTCAACCCCATCCACGTATTCAATGTCGCCGGAGTCACTGGCCGCCCTAACGTGGATTGGTGCGAATCTCACAAGGTGGAGACTATCCGGACTAACGTGGTCGGAACTTTGACATTAGCCGATGTTTGCAGAGAGCGAGGACTTGTTCTCATCAATTACGCCACCGGCTGCATCTTTGAGTACGATGAGCATAACCCCCTCGGATCCGGCAGTAGGAAGATACCCCCAATTTCATTGTACTTTTA 422 0.5379 MGFPASGASADKPLKFLIYGRTGWIGGLLGKLCESQGIDYAYGSGRLENRSSLEADIATVNPIHVFNVAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLVLINYATGCIFEYDEHNPLGSGSRKIPPISLYF 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02062 140 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 6 129 - -
Bva11g02062 140 Gene3D - 6 139 - -
Bva11g02062 140 Pfam RmlD substrate binding domain 15 128 IPR029903 -
Bva11g02062 140 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 126 IPR036291 -
Bva11g02062 140 PANTHER BNAC05G13120D PROTEIN 6 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02062 Bva-Chr11 17275120 17275542 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02062 K12451 - twl:119980371 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02062 11 17275120 17275542 Bva08g00229 08 1108233 1110024 BWGD
Bva11g02062 11 17275120 17275542 Bva11g02062 11 17275120 17275542 ECH