Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02059 ATGGCATCGTCTTCCCCTATGGACGAAATGAAGAATCAGGAACAGgagcaacagcagcagcagcagccaGTGAAAGAGTTAATgcacaaaaccaaaataattcaatttcttggGCGCACAACTCCTATCATTCTTCAGAATGACAATGGTCCCTGTCCTCTCCTTGCTATCTGTAACGTTCTTCTGCTGAGGAACAACTTAAATTTGAGTCCTGATATTGCTGAAGTCTCACAGGAAAAATTGCTTTCACTGGTGGCTGAGCGATTGATCGATTCCAATAGCAATGTCAATGACAAGGATGCTGGCTATGTTCAAAATCAACAACAGAACATTGCCGATGCAATTGATTTGCTTCCAAGACTTGCTACTGGAAttgatgtaaatataaaattcaggAGaATAGATGATTTTGAGTTTACTCCAGAGTGTGCCATATTTGATCTGCTTGACATCCCCTTGTGTCATGGCTGGATCGTGGATCCTCAGGATCATGATACTGCTAATGTAATAGGATCAAAATCCTATAATGCTCTTACGGGGGAACTTGTTGCTCTTGAAACACGAAACATGGAAAGTCAGCCTAACAATAATCCTGAAGAAGATTCCGTTGATTTTGCTGCTGCAACAACTGCAGTACTTGGTGTTCCGTCTCCAAATCTTTCAAAAACCAGGTCCTTTGATGATTCTCCACGTTCTGGTTCTGGTCCAAAACTAAGAAAAGGGGATCTTGAAGAAGAGGCAGAGTTGTTGAGAGCTTTGAAGCTATCTGTAGATTCAGTGAGTGATCCTCCTCACATTCAGGTTAGTGAAGGGACTGTGTCTGTAAATATGGATGAAATTACTTGTAAACAGGAGGTTTCTGTAGATTCTGGAGATAATTTAGAGAAGAGCACTGATGCTGAAACCAAAGATTTTCATAAGCCCGAACCTTCCCTGTTAAATGATTATACTGCTTCAAGGAATGATAGTAAGAAAGATATGTATTCTGTGTCTACCCCAAGGAAAGAAGCTTATTCATCCATTAAAACTGATGGCACAAATGACCTTAATCAAACGACTTACATGGGACCTGAAGAATCTGTTGATCAGAACGATGGGGTTGATAAGAACAGTCCTGATACATTGGTTCAGGCCGAAAGTGCAGCTCTCCTTTCTTCTGGAAAAGCTTCTGTGTCTTTGCATGAGAGCCATGCTGATGTCTCAGGACAGAGTGAAAAAGTTCACAATCCATCCACTCTTATCACCAATAATCCTGAAAATGCAGATGAACCTTGTGAACGTGATGCAACAGGCGTATCGTGCTTGTCTGCACCACATACAAATACAGATTCATCCAGCGGCAGATTTCATCCAACTGATGGCTCTGGAGCATCGCCTACAAATGTTGATGGAAGTGAACCAATATATGAAGGAGAGGAATGTGTATTGGATACAAGAAGTGCAACATTTGAGGATCGTGAACCTGTCTATGAGGGTGAGATGGTGCTTGCAGAACGAGCTGACAAAAGCAGCTTAGCAGCCTCTGATGTTAGAGCTAATGATGAACTTTCTCCACAACAAGGGGAATTGATCAGGAGTTTCTTCAGGAATAACGCTAGTCAATTGACATTTTATGGCCTTTTCTGTTTACAAGACGGTCTTAAAGAGCGTGAGCTATGTGTTTTCTTCCGCAACAATCATTTCAGCACCATGTTTAAGtTTGAGGGTGAGCTTTATCTCTTAGCTACAGACCAAGGTTACATAAATCAGCCTGATCTGGTGTGGGAAAAACTGAATGAGGTCAACGGCGATACATTGTTTATGACTGGTAATTTCAAGGAATTCAAGGTAGAAAGTCATGGAAACAGTAACTGGGATGTGCATAATGCTGTGACCAGCACGGCTGACTATCTTGCCAGCATAGATAAGGCTGCGCAGGGGGGCTTAGAGATGAATTCTGATCTGCAATTGGCAATAGCCTTGCAACAACAGGAGTTTGAGCAACAGCCACAACGTCATAATTCACAACAAGCATCCATTAGTCCCAGTTCGAGACTGGTCACAGGTCCCCAGGTGGCAAGAAACAGTGGGAGgcattcatcttcttcatcttctaagCCCGAAGGAAAATCCAAAGATAAATGTACAGTGATGTG 2135 0.4047 MASSSPMDEMKNQEQEQQQQQQPVKELMHKTKIIQFLGRTTPIILQNDNGPCPLLAICNVLLLRNNLNLSPDIAEVSQEKLLSLVAERLIDSNSNVNDKDAGYVQNQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTPECAIFDLLDIPLCHGWIVDPQDHDTANVIGSKSYNALTGELVALETRNMESQPNNNPEEDSVDFAAATTAVLGVPSPNLSKTRSFDDSPRSGSGPKLRKGDLEEEAELLRALKLSVDSVSDPPHIQVSEGTVSVNMDEITCKQEVSVDSGDNLEKSTDAETKDFHKPEPSLLNDYTASRNDSKKDMYSVSTPRKEAYSSIKTDGTNDLNQTTYMGPEESVDQNDGVDKNSPDTLVQAESAALLSSGKASVSLHESHADVSGQSEKVHNPSTLITNNPENADEPCERDATGVSCLSAPHTNTDSSSGRFHPTDGSGASPTNVDGSEPIYEGEECVLDTRSATFEDREPVYEGEMVLAERADKSSLAASDVRANDELSPQQGELIRSFFRNNASQLTFYGLFCLQDGLKERELCVFFRNNHFSTMFKFEGELYLLATDQGYINQPDLVWEKLNEVNGDTLFMTGNFKEFKVESHGNSNWDVHNAVTSTADYLASIDKAAQGGLEMNSDLQLAIALQQQEFEQQPQRHNSQQASISPSSRLVTGPQVARNSGRHSSSSSSKPEGKSKDKCTVM 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02059 711 MobiDBLite consensus disorder prediction 659 697 - -
Bva11g02059 711 Pfam MINDY deubiquitinase 58 181 IPR033979 GO:0004843|GO:1990380
Bva11g02059 711 MobiDBLite consensus disorder prediction 1 25 - -
Bva11g02059 711 MobiDBLite consensus disorder prediction 434 462 - -
Bva11g02059 711 MobiDBLite consensus disorder prediction 289 310 - -
Bva11g02059 711 MobiDBLite consensus disorder prediction 333 359 - -
Bva11g02059 711 MobiDBLite consensus disorder prediction 387 419 - -
Bva11g02059 711 MobiDBLite consensus disorder prediction 659 711 - -
Bva11g02059 711 MobiDBLite consensus disorder prediction 285 372 - -
Bva11g02059 711 MobiDBLite consensus disorder prediction 216 230 - -
Bva11g02059 711 PANTHER NF-E2 INDUCIBLE PROTEIN 9 711 IPR007518 GO:0004843|GO:1990380
Bva11g02059 711 MobiDBLite consensus disorder prediction 216 242 - -
Bva11g02059 711 MobiDBLite consensus disorder prediction 387 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02059 Bva-Chr11 17254534 17259368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02059 K01309 - gmx:100808340 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02059 11 17254534 17259368 Bva11g02059 11 17254534 17259368 ECH