Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02052 atGGCATCTCTGACTCTGAGGTCACTGGCATCAGCTGTTGCACCTACCAATACCATTCCTGCAACATTCTCGTTTTCCGCCTTTACATATCCTTGTTCTCAATCTTGCCAATCTCTTAAAACCCGGAACGTGGTCTTCTTTTCCATCTTACCAACTTGGGGCTCAAATCGTTTGGGCTTGGTCAAAACATTTGCCGACTCTCCTTCATCTCTGCACATGGACGCGCCACCCTCAGAACCCAAGCCCTCTTCTCAGGCTGATGCTGCCTTGCCTGAGTTACTGACGGAGTACATGGTGGATATGAAATGTGAAGGTTGTGTTAATGCGGTGAAGAACAAGTTGCAGACAATAAACGGAGTCAAGAACGTAGAGGTGTATCTGAGCAATCAGGTAGTTAGGATTCTTGGTTCAACACCAATCAAAACCATGACGGCAGCTTTGGAACAGACTGGTAGAAAAGCCCGATTGATTGGACAAGGAGTGCCTGAAGACTTCTTAATATCTGCTGCCGTCTCAGAATTCAAGGGCCCAGGTATTTTTGGTGTTGTTCGCCTGGCTCAAGTGAACATGGAACTGTCTAGGATTGAAGCCAACTTCAGTGGGCTGTCACCGGGAAAGCATGGTTGGTCTATAAATGAGTTTGGAGATCTAACTAGAGGTGCAGCAAGCACTGGGAAAGTGTTCAATCCAACAAATGCGGGGAACATTAAAGAGCCTCTTGGCGACCTGGGAACATTAGAAGCAGATGAAAAAGGCGAAGCATTCTTCTCCGGCGTCAAAGAAAATCTTCGGGTGGCTGATCTTATTGGACGATCTGTGGTGGTATATGCAACTGAAGATAAATCAGATGACGGTATAGCTGCAGCAGTAATTGCCAGAAGTGCCGGAGTTGGTGAGAACTATAAAAAACTCTGTACGTGCGATGGTACCATCATCTGGGAAGCTAGCGACAGAGACTTTGTTACAAGCAAAGTCTA 977 0.4647 MASLTLRSLASAVAPTNTIPATFSFSAFTYPCSQSCQSLKTRNVVFFSILPTWGSNRLGLVKTFADSPSSLHMDAPPSEPKPSSQADAALPELLTEYMVDMKCEGCVNAVKNKLQTINGVKNVEVYLSNQVVRILGSTPIKTMTAALEQTGRKARLIGQGVPEDFLISAAVSEFKGPGIFGVVRLAQVNMELSRIEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFNPTNAGNIKEPLGDLGTLEADEKGEAFFSGVKENLRVADLIGRSVVVYATEDKSDDGIAAAVIARSAGVGENYKKLCTCDGTIIWEASDRDFVTSKV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02052 325 CDD HMA 96 155 IPR006121 GO:0046872
Bva11g02052 325 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 20 325 IPR024134 -
Bva11g02052 325 Gene3D Superoxide dismutase, copper/zinc binding domain 163 293 IPR036423 GO:0006801|GO:0046872
Bva11g02052 325 PANTHER COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE, CHLOROPLASTIC/CYTOSOLIC 20 325 - -
Bva11g02052 325 Pfam Copper/zinc superoxide dismutase (SODC) 181 282 IPR001424 GO:0006801|GO:0046872
Bva11g02052 325 SUPERFAMILY HMA, heavy metal-associated domain 95 157 IPR036163 GO:0046872
Bva11g02052 325 SUPERFAMILY Cu,Zn superoxide dismutase-like 158 317 IPR036423 GO:0006801|GO:0046872
Bva11g02052 325 ProSiteProfiles Heavy-metal-associated domain profile. 93 156 IPR006121 GO:0046872
Bva11g02052 325 Pfam Heavy-metal-associated domain 97 153 IPR006121 GO:0046872
Bva11g02052 325 Gene3D - 84 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02052 Bva-Chr11 17224028 17227125 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02052 K04569 - jre:109010785 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02052 11 17224028 17227125 Bva11g02052 11 17224028 17227125 ECH