Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02039 ATGGCTACCTCTGGTGTTCATAATCATAGAAATGGCACTCACAGTCACAAAAGCTCTCTCAAGGTGGACAGGCCTCTCTCCGtcaactcaaatcccaagtCTCATCTCAAGTCAAAGCCTTTGGCTTCTACTGGTCTACGCCGGAATAGCACTGGCTCCCTCACCAGCAGCACTGCAGCTTCTAAGGACGATGCTGGAGTTCCGGGAAGAGTCAGAGTCGCAGTTCGATTGCGGCCGAAGAATGCAGAGGAATTGGTGGCAGATGCTGATTTTGCAGACTGTGTGGAGCTACAGCCAGAGCTCAAAAGGTTGAAACTTCGAAAGAACAATTGGGATTCTGATACTTATGAATTTGATGAGGTGTTCACAGAATCTGCATCACAAAAGCGTGTTTATGAAGTTGTGGCTAGGCCTATTGTGGAGAGTGTTCTGGATGGTTTTAATGGGACAATTATGGCATATGGGCAGACTGGTACAGGTAAAACTTATACTCTTGGACGACTTGGGGAGGAAGACACAGCAGCACGTGGGATAATGGTGCGTGCTATGGAGGATATTCTAGCAGATGTTTCCTTGGAAGCTGATTCTGTTTCAGTGTCCTATTTGCAGCTTTATATGGAGACTGTACAAGATCTTCTTGACCCCGCTAATGATAACATAACCATTGTGGAAGACCCCAAAACTGGAGATGTTTCACTGCCTGGAGCTAGGCTAGTTGAAATTAGGGACCAGCAGAGTTTTGTAGAACTACTGCGATTAGGGGAGGCTCACCGCTTTGCTGCAAATACAAAATTGAATACAGAATCTTCTCGAAGTCATGCTGTTCTCATGGTACATGTAAAGAAATCTGTCAACGGAAGAGATTCAGCTCATTCAAGAGAAAATGGCAACCGTACACGCATGGTTAAATCTTTAAAGCCTCCTATTGTTCGGAAGGGCAAGTTGGTTGTTGTAGATCTTGCTGGTTCAGAGCGAATTGATAAGTCAGGAAGTGAAGGACATACCCTAGAGGAAGCTAAATCTATCAATCTGTCCTTAAGTGCATTGGGAAAATGTATTAATGCACTGGCAGAGAATAGTGCGCATGTGCCATTTCGTGACTCAAAGCTTACTAGATTACTACGTGATTCATTTGGAGGTACAGCAAGAACTTCATTGGTCATTACTATTGGGCCATCTCCACTTCATCGGGGAGAGACCGCCAGTACCATAATGTTCGGACAGAGGGCTATGAAGGTGGAGAACATGGTAAAATTGAAAGAGGAGTTTGATTACAAAAACTTATCTAGAAGGCTAGACGTACAGTTAGACAAACTTATCATGGAAAATGAAAGGCAGCAGAAGGCGTTTGAGGATGAAATTGAAAGGTTAACCATAGAAGCTGAGCATCGGATATCTGAAGCTGAAAAAAACTTTGGGAACGCACTGGAGAAGGAAAGATTGAAATACCAGAAAGACTACATGGAATCAATTAAGAAGCTTGAAGAGCAGCTAGCGATCAATCAGAGAAAGAATGAGAATACTCACGCGAAATCAAGTGGAGAgACTCACAAGGTTTCTTTTGAGGAAATGGTTGATCTGAAAAAGAGGCTCCAGAAAGAGACTCTTTTGAAAAAAGCTGCTGAAGAGGAAATCAATAATCTGAAAAATCAAGTGGCGGAATTGAAAAAGTCAGAGGCATCAAGAAACTCTGAGATCTTAAAACTTCACAAGATTTTTGAAGCAGATGAGACAAGACACCAGCTTGACAGAGGTGGATTGAAACAAAATAGTGGTCCTGATTCTCTTAAGCCCCAACTCAAACATCAGCAGCAAGCTTCAGGAAATGGAGAGAAGACCTCAATAGCCAAACTCTTTGAACAAGTGGGGTTGCAGAAAATTTTGGCATTGCTTGAAGCGGAAGATACTGATGTGCGAGTCCATGCTGTGAAAGTCATAGCAAATCTAGCTGCCGAAGAAGCAAACCAGGAGAAGATTGTACAAGCAGGTGGTCTCACATCCCTGCTTATGCTGCTTAAAAGCTCCCAAGATGAGACCATACATAGAGTTGCAGCTGGTGCTATTGCGAATTTGGCAATGAATGAAATCAACCAAGAACTCATTATGGCCGAAGGGGGCATTAGTTTGTTGTCAACGACAGCAGCCAATGCTGACGACCCTCAGACCCTTCGAATGGTTGCTGGAGCCCTTGCTAATCTTTGTGGCAATGATAAGTTACAAATGAAGCTAAGAGGCGAGGGCGGTATCAAGGCACTTCTGGGAATGATCAGATGCAAGCATCCTGATGTACATGCACAGGTCGCTCGTGGAATAGCAAACTTTGCAAAATGTGAATCAAGAGCATCTACTCGAGGGACACAATCCGGAAGGTCTTTCCTTATTGAGGATGGTGCACTTCCATGGATTGTACAGAACGCAAATAATGATGCCTCCTCAATCAGGCGTCACATTGAGCTTGCACTCTGTCACTTAGCACAGCATGAAGCGAATGCAAGAGATATGATTAGTGGAGGTGCATTATGGGAGCTGGTTCGTATCTCACGAGATTGTTCCAGGGAAGACATAAGGACTCTTGCACATCGAACCCTCATCTCCAGCCCCACTTTCCAAGCAGAGATTAGGCGTTTGCGAACAGATTATTA 2642 0.4379 MATSGVHNHRNGTHSHKSSLKVDRPLSVNSNPKSHLKSKPLASTGLRRNSTGSLTSSTAASKDDAGVPGRVRVAVRLRPKNAEELVADADFADCVELQPELKRLKLRKNNWDSDTYEFDEVFTESASQKRVYEVVARPIVESVLDGFNGTIMAYGQTGTGKTYTLGRLGEEDTAARGIMVRAMEDILADVSLEADSVSVSYLQLYMETVQDLLDPANDNITIVEDPKTGDVSLPGARLVEIRDQQSFVELLRLGEAHRFAANTKLNTESSRSHAVLMVHVKKSVNGRDSAHSRENGNRTRMVKSLKPPIVRKGKLVVVDLAGSERIDKSGSEGHTLEEAKSINLSLSALGKCINALAENSAHVPFRDSKLTRLLRDSFGGTARTSLVITIGPSPLHRGETASTIMFGQRAMKVENMVKLKEEFDYKNLSRRLDVQLDKLIMENERQQKAFEDEIERLTIEAEHRISEAEKNFGNALEKERLKYQKDYMESIKKLEEQLAINQRKNENTHAKSSGERLQKETLLKKAAEEEINNLKNQVAELKKSEASRNSEILKLHKIFEADETRHQLDRGGLKQNSGPDSLKPQLKHQQQASGNGEKTSIAKLFEQVGLQKILALLEAEDTDVRVHAVKVIANLAAEEANQEKIVQAGGLTSLLMLLKSSQDETIHRVAAGAIANLAMNEINQELIMAEGGISLLSTTAANADDPQTLRMVAGALANLCGNDKLQMKLRGEGGIKALLGMIRCKHPDVHAQVARGIANFAKCESRASTRGTQSGRSFLIEDGALPWIVQNANNDASSIRRHIELALCHLAQHEANARDMISGGALWELVRISRDCSREDIRTLAHRTLISSPTFQAEIRRLRTDY 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02039 866 PANTHER KINESIN-RELATED 53 560 IPR027640 GO:0003777|GO:0007018
Bva11g02039 866 PANTHER KINESIN-RELATED 559 858 IPR027640 GO:0003777|GO:0007018
Bva11g02039 866 PANTHER KINESIN-LIKE PROTEIN KIN-UA 53 560 IPR033291 GO:0008017|GO:0032886|GO:0048364
Bva11g02039 866 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 649 692 IPR000225 GO:0005515
Bva11g02039 866 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 608 650 IPR000225 GO:0005515
Bva11g02039 866 CDD KISc 70 411 - -
Bva11g02039 866 MobiDBLite consensus disorder prediction 22 62 - -
Bva11g02039 866 PANTHER KINESIN-LIKE PROTEIN KIN-UA 559 858 IPR033291 GO:0008017|GO:0032886|GO:0048364
Bva11g02039 866 Coils Coil 484 511 - -
Bva11g02039 866 ProSitePatterns Kinesin motor domain signature. 313 324 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bva11g02039 866 Pfam Kinesin motor domain 76 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva11g02039 866 MobiDBLite consensus disorder prediction 578 595 - -
Bva11g02039 866 ProSiteProfiles Kinesin motor domain profile. 70 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva11g02039 866 MobiDBLite consensus disorder prediction 566 595 - -
Bva11g02039 866 PRINTS Kinesin heavy chain signature 146 167 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva11g02039 866 PRINTS Kinesin heavy chain signature 314 332 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva11g02039 866 PRINTS Kinesin heavy chain signature 363 384 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva11g02039 866 Gene3D Kinesin motor domain 62 424 IPR036961 -
Bva11g02039 866 Pfam Armadillo/beta-catenin-like repeat 641 678 IPR000225 GO:0005515
Bva11g02039 866 Gene3D - 432 851 IPR011989 -
Bva11g02039 866 SUPERFAMILY ARM repeat 600 849 IPR016024 -
Bva11g02039 866 SMART kinesin_4 68 421 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva11g02039 866 Coils Coil 517 551 - -
Bva11g02039 866 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 448 IPR027417 -
Bva11g02039 866 Coils Coil 436 471 - -
Bva11g02039 866 MobiDBLite consensus disorder prediction 1 66 - -
Bva11g02039 866 SMART arm_5 680 721 IPR000225 GO:0005515
Bva11g02039 866 SMART arm_5 722 762 IPR000225 GO:0005515
Bva11g02039 866 SMART arm_5 638 679 IPR000225 GO:0005515
Bva11g02039 866 SMART arm_5 598 637 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02039 Bva-Chr11 17179861 17188089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02039 71 439 Miscellaneous Gene Families AT2G21380 32.546 1.33e-44 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02039 - K10396 gmx:100804612 1342.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02039 11 17179861 17188089 Bva11g02039 11 17179861 17188089 ECH