Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02037 ATGTCAGCAACATCAAAGCCGGGAGTGGGAGACAGCCACCTGTGTGATAAAACCGCCCCGGCACCACCATCCCTTACTCAACAATGGTCATGGCCTGCCAATTATGGGAAGATGCTGCTTTCAGAGTCAAGAAAACAAGGGAGAATAGCCCTTCCATTGGTGATCATGAATTTGGCATGGTTTGCCAAGACAGCCATCACAACTGCATTTTTGGGCCGTCTGGGAGAACTCAACTTAGCTGGTGGCGCTCTCGGCTTCACTTTTGCTAATGTTACTGGCTTCTCTGTCTTGAATGGTCTATCCGGTGCCATGGAACCCATCTGTGGACAAGCTTATGGGGCTAAAAATTTCAGGCTCCTTCATAAGACCCTTATCATGACTATCTCCTTTTTGCTATTGGCAACACTTCCGATATCTTTTCTGTGGCTTAATgttgacaaaattttaattcacttCGGCCAAAAAAGAGACATTTCAATTGTAGCCAGAACCTATATTTCCTACCTCCTGCCCGACTTGTTAGTCACCTCATTTCTCTGCCCCTTAAGAGCCTACTTGAGCTCTCAGTGCATAACCCTTCCAACTATGTTTAGCACGGGTGTGGCTCTAGCCTTTCACATACCAATTAACATATTACTCTCAAAGGTTATGGGGCTCAGAGGAGTCTCAATGGCAGTTTGGATCACTGATCTCATAATTGTGCTCCTGCTTTCCATTTATGTTGTGATTCTTGAGAATAGACAGGAAAAGAGGTGGAGGGAAGGAGGATGGTTGAACCAAAGCGTTAAGGATTGGATTATGATGCTCAAGCTTAGCGGATCATGCTGCCTCAATACCTGTCTGGAGTGGTGGTGTTATGAGATTCTGGTCTTGCTCAGTGGCCACCTTGCCAATGCGGAGCAAGCAGTAGGAGTATTGGTCATTGTGCTAAACTTTGACTATCTGCTATACTCGGTGATGCTATCGCTTGCCACTTGTGTTTCCACTCGTGTGTCAAATGAGCTTGGTGCTAACCAAGCAGGCCGTGCTTACCGGTCAGCTCGTGTGTCTCTTGCAGCCGCCATTATCTTGGGTTGTCTCGGCAGCTTGCTGATGGTGGCTGCAAGGGGAATTTGGGGTCCTCTGTTTAGCCACGATAAGGGCATTATAAGGTGCGTAAAGAAGACCATGTTGCTGATGGCTCTGGTGGAAGTATTCAATTTCCCGTTAGCAGTTTGTGGAGGCATCGTCCGGGGTACAGCTCGTCCCTGGATGGGCACGTACGCTAATCTTGCTGGATTTTATCTCGTTGCCTTGCCTCTGGCCATGGTTTTTGCCTTCAAACTCCATCTTGCCCTTCCTGGACTCTTCATTGGACTTTTGATTGGTATAGTTACGTGCTTAATGCTGTTACTCGTATTTATTGCTTGTATAAATTGGGCGGAAGAAGCTGGCAAGGCACAAACACTAGCATCTAATGTGCAGGCACAAGTTGCTACAGATGGCGCAAATGAACAAACTGAAAATGCTCAAGTATA 1517 0.4634 MSATSKPGVGDSHLCDKTAPAPPSLTQQWSWPANYGKMLLSESRKQGRIALPLVIMNLAWFAKTAITTAFLGRLGELNLAGGALGFTFANVTGFSVLNGLSGAMEPICGQAYGAKNFRLLHKTLIMTISFLLLATLPISFLWLNVDKILIHFGQKRDISIVARTYISYLLPDLLVTSFLCPLRAYLSSQCITLPTMFSTGVALAFHIPINILLSKVMGLRGVSMAVWITDLIIVLLLSIYVVILENRQEKRWREGGWLNQSVKDWIMMLKLSGSCCLNTCLEWWCYEILVLLSGHLANAEQAVGVLVIVLNFDYLLYSVMLSLATCVSTRVSNELGANQAGRAYRSARVSLAAAIILGCLGSLLMVAARGIWGPLFSHDKGIIRCVKKTMLLMALVEVFNFPLAVCGGIVRGTARPWMGTYANLAGFYLVALPLAMVFAFKLHLALPGLFIGLLIGIVTCLMLLLVFIACINWAEEAGKAQTLASNVQAQVATDGANEQTENAQV 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02037 505 TIGRFAM matE: MATE efflux family protein 52 449 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva11g02037 505 Pfam MatE 275 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva11g02037 505 Pfam MatE 52 211 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva11g02037 505 PANTHER MULTIDRUG RESISTANCE PROTEIN 31 488 - -
Bva11g02037 505 PANTHER PROTEIN DETOXIFICATION 56 31 488 - -
Bva11g02037 505 MobiDBLite consensus disorder prediction 1 25 - -
Bva11g02037 505 CDD MATE_eukaryotic 42 479 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02037 Bva-Chr11 17166184 17168202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02037 K03327 - gmx:100804083 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02037 11 17166184 17168202 Bva11g02037 11 17166184 17168202 ECH