Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02032 ATGGTGAACGCAACCAAAGGACTGTTTATTTCCTGCGATGTTCCTATGGCTCAGTTCATCATTAACTTGAATGATTCAATGCCACCGTCCGACAAGTTCATTATATGTGTGTTGGATAACACTCACATGTTCGTTCAACCTCATGTGGCCGAAATGCTTCCGAGGGCCATCGCAGACTTCAGAAACCAGAATGCGTATGCTAAACCCATTTG 212 0.4434 MVNATKGLFISCDVPMAQFIINLNDSMPPSDKFIICVLDNTHMFVQPHVAEMLPRAIADFRNQNAYAKPI 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02032 70 Gene3D - 1 68 IPR035935 -
Bva11g02032 70 SUPERFAMILY TFB5-like 6 67 IPR035935 -
Bva11g02032 70 PANTHER GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 1 69 - -
Bva11g02032 70 PANTHER GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 1 69 IPR009400 GO:0000439|GO:0006289|GO:0006367
Bva11g02032 70 Pfam Transcription factor TFIIH complex subunit Tfb5 1 68 IPR009400 GO:0000439|GO:0006289|GO:0006367
Bva11g02032 70 SMART Tbf5_2 1 68 IPR009400 GO:0000439|GO:0006289|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02032 Bva-Chr11 17141101 17141396 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02032 K10845 - pvy:116140886 114.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02032 11 17141101 17141396 Bva11g02032 11 17141101 17141396 ECH