Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02017 ATGTCACAGTTGAAGACAGTACCGCTGTCAGAAATTGACAACATACCGTCGACGCCAGGCAAGTTCAAGTCAGAGAAATCTCCCTACGTTGATCGCCTCAGGTTCCATTCTACTATCTCCAGACTCACTCTCTGGTCTTCCTTTTTCCTGGCCTTcactatatttttcttctttctctcttctccctcggcttcttcttctcccGCCGTTGGATCCCCTCGCCGAGCTCTCGGTGACTCCTGGGGTGGACCCGATTGGGAAAAACGTGTAAGCAAATCGGCTCGTAGGAACTCTGCATCTGGCTTGACAGTCCTGGTCACCGGGGCGGCTGGTTTTGTCGGCACCCACGTGTCAGCGGCGTTGAAGCGGCGCGGTGATGGCGTGCTTGGACTTGACAATTTCAACCTCTACTACGATCCAAACCTCAAACGAGCCCGGCAAAACCTTCTTGACCGCGCGGGGGTATTTGTTGTTGAGGGAGATATCAACGATTCGGCGCTCCTTCAGAAGCTTTTCGATGTTGTGCCTTTTACCCATGTAATGCACCTTGCGGCACAGGCCGGCGTTCGCTACGCAATGCAGAATCCCGGATCCTATGTACACAGCAATATCGCTGGCTTTGTCAATCTTCTTGAAGTTTGTAGATCAGCGAATCCGCAACCTGCAGTTGTATGGGCTTCTTCAAGTTCCGTGTATGGGCTTAATTCTAAGGTACCATTCGCAGAAAAAGACAGAACTGATCGACCAGCCAGTCTTTATGCTGCAACTAAAAAGGCTGGTGAAGAAATTGCACATacttataatcatatatatgggCTTTCAATTACTGGGTTGCGGTTCTTCACGGTGTATGGTCCATGGGGGCGCCCTGATATGGcttatttcttcttcacaAAAGATATACTTAAAGGAAAGACAATTACCATTTTTGAGGCCCCAGATCACGGAACCGTTGCAAGAGATTTTACCTACGTCGATGATGTTGTCAAAGGGTGCCTGGCAGCTTTGGACACGGCCAAGAAAAGTACCGGTAGTGGTGGGAAGAAGAAGGGCCCTGCACAATTGAGGATTCTTAATCTGGGTAATACTTCACCAGTGCCTGTGAGTAAGCTTGTAAGCATATTGGAGAAGCTTCTGAACGTGAAGGCTAAAAAGAAGTTGGTCCCAATGCCTAGAAATGGCGATGTTAAATTTACACATGCAAATATTAGCATAGCGCACAAGGTGCTTGGCTACAGGCCGACCACTGATTTGGAGACAGGACTCAAGAAGTTTGTACGGTGGTACCTTGATTTTTATTCTGGGTCTAAGAAGAGTGCGTGGTG 1325 0.4589 MSQLKTVPLSEIDNIPSTPGKFKSEKSPYVDRLRFHSTISRLTLWSSFFLAFTIFFFFLSSPSASSSPAVGSPRRALGDSWGGPDWEKRVSKSARRNSASGLTVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNLYYDPNLKRARQNLLDRAGVFVVEGDINDSALLQKLFDVVPFTHVMHLAAQAGVRYAMQNPGSYVHSNIAGFVNLLEVCRSANPQPAVVWASSSSVYGLNSKVPFAEKDRTDRPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDILKGKTITIFEAPDHGTVARDFTYVDDVVKGCLAALDTAKKSTGSGGKKKGPAQLRILNLGNTSPVPVSKLVSILEKLLNVKAKKKLVPMPRNGDVKFTHANISIAHKVLGYRPTTDLETGLKKFVRWYLDFYSGSKKSAW 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02017 441 Gene3D - 102 434 - -
Bva11g02017 441 PRINTS Nucleotide sugar epimerase signature 320 335 - -
Bva11g02017 441 PRINTS Nucleotide sugar epimerase signature 130 146 - -
Bva11g02017 441 PRINTS Nucleotide sugar epimerase signature 395 412 - -
Bva11g02017 441 PRINTS Nucleotide sugar epimerase signature 355 370 - -
Bva11g02017 441 Pfam NAD dependent epimerase/dehydratase family 104 340 IPR001509 -
Bva11g02017 441 PANTHER UDP-GLUCURONATE 4-EPIMERASE 5 13 439 - -
Bva11g02017 441 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 100 435 IPR036291 -
Bva11g02017 441 PANTHER EPIMERASE-RELATED 13 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02017 Bva-Chr11 17068568 17070398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02017 9 440 Miscellaneous Gene Families AT4G00110 76.157 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02017 K08679 - fve:101298705 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02017 11 17068568 17070398 Bva11g02017 11 17068568 17070398 ECH