Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02004 ATGCCTGTCGCTTGTTCCCGATCCACCGTATTTGCGACAATCCAACGCCAGGTTATGGCGACCACGATTCCTCCACTCAGATCGCGCCGCGTCGCAGTTATAGGCGCTGGTGCCGCCGGCCTAGTCGCCGCCCGTGAGCTCCGACGAGAAGGCCATCGGGTGGTGGTTTTTGAGCGAGGTGACCAAGTTGGTGGCACCTGGGTGTATACCTCCGAGGTGGAGTCCGATCCTATTGGGATTGACCCGAATCGAGCCGTAGTCCATTCCAGCCTCTATCAATCTCTGCGTACCAATCTCCCGAGGGAAGTGATGGGTTTTCGAGATTACCCATTTGTGAGGCGAGAAGTCAAAGGGAGAGATTCGAGAAGGTTCCCGGGTCACAAAGAGGTACTGATGTATCTACAAGACTTTACCTCCGCCTTTGAGATCGCCGAATTGGTGAGGTTCGAGTCGGAGGTGGTGTTTGCTGGATTGGCAGAAAGTGGAAAATGGAGAGTGAGGTCAATAACGAAGGGTGGGGTTACGGTCGATGAGATTTATGACGCTGTGGTCGTTTGCAATGGGCATTATACACAACCTCACATTGCTGATATCCCAGGCATAACTGCATGGCCAGGGAAGCAGATGCACGGCCATAATTATAGGACACCTGACCCCTTTCGAGACCAAGTTGTTGTACTGATAGGCAATGCTGCAAGTGCTGTTGATATCTCTCGAGATATTGCCACAGTTGCAAAAGAGGTCCATATTGCAGCTAGGTCAGTTGAAGATAATAAACTTGGAAAGCTGCCTGGCCATGATAATATGTGGCTTCATTCTATGATCGATAGTGCCCTTGAAGATGGTAGAGTGGTTTTCCGAGGTGGAAATGCAGTTTGCGCTGACGTCATTCTACACTGCACTGGGTACAAGTATAATTTCCCTTTCCTTCAAACTGATGGCACGATAACTGTAGAGGATAATTGTGTGGGACCGCTCTACAAGCACGTTTTCCCACCAGAATTGGCCCCTTGGCTTTCATTTGTGGGGCTACCTTGGAagGTTGTTCCCTTCCCCTTGTGCGAGCACCAGAGCAAATGGATAGCTGGGATTTTGTCTAATCGAATTGCACTTCCATCAAAAGAGGAAATGGTGGAAGATGTTAAAGCATTTTACTCATCGCTTGAAGCATTTGGCATCCCTAAGCGTTACGCTCATAACATAGGCCCTGTACAGTGGGACTACAACGATTGGATAGCTGATCAGTGTGGGTTTCCTGTTATAGAAGAATGGAGAAAGGAAATGTATAAAGCCGCATCTAAGAACAGAACCATAAGGCCTGAGTCTTACCGTGACGAATGGGAGGATCACGAGTTAATTTTACAAGCTCAAGAGGATTTTAGCAACACAGCTAGCATCTG 1400 0.4871 MPVACSRSTVFATIQRQVMATTIPPLRSRRVAVIGAGAAGLVAARELRREGHRVVVFERGDQVGGTWVYTSEVESDPIGIDPNRAVVHSSLYQSLRTNLPREVMGFRDYPFVRREVKGRDSRRFPGHKEVLMYLQDFTSAFEIAELVRFESEVVFAGLAESGKWRVRSITKGGVTVDEIYDAVVVCNGHYTQPHIADIPGITAWPGKQMHGHNYRTPDPFRDQVVVLIGNAASAVDISRDIATVAKEVHIAARSVEDNKLGKLPGHDNMWLHSMIDSALEDGRVVFRGGNAVCADVILHCTGYKYNFPFLQTDGTITVEDNCVGPLYKHVFPPELAPWLSFVGLPWKVVPFPLCEHQSKWIAGILSNRIALPSKEEMVEDVKAFYSSLEAFGIPKRYAHNIGPVQWDYNDWIADQCGFPVIEEWRKEMYKAASKNRTIRPESYRDEWEDHELILQAQEDFSNTASI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02004 466 PRINTS Flavin-containing monooxygenase (FMO) signature 29 45 IPR000960 GO:0050660|GO:0050661
Bva11g02004 466 PRINTS Flavin-containing monooxygenase (FMO) signature 287 314 IPR000960 GO:0050660|GO:0050661
Bva11g02004 466 PRINTS Flavin-containing monooxygenase (FMO) signature 209 223 IPR000960 GO:0050660|GO:0050661
Bva11g02004 466 PRINTS Flavin-containing monooxygenase (FMO) signature 236 251 IPR000960 GO:0050660|GO:0050661
Bva11g02004 466 PRINTS Flavin-containing monooxygenase (FMO) signature 352 365 IPR000960 GO:0050660|GO:0050661
Bva11g02004 466 PRINTS Flavin-containing monooxygenase (FMO) signature 53 77 IPR000960 GO:0050660|GO:0050661
Bva11g02004 466 PANTHER DIMETHYLANILINE MONOOXYGENASE 24 462 - -
Bva11g02004 466 Gene3D - 296 460 IPR036188 -
Bva11g02004 466 Gene3D - 28 200 IPR036188 -
Bva11g02004 466 SUPERFAMILY FAD/NAD(P)-binding domain 27 254 IPR036188 -
Bva11g02004 466 Gene3D - 201 295 IPR036188 -
Bva11g02004 466 Pfam Flavin-binding monooxygenase-like 284 384 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bva11g02004 466 Pfam Flavin-binding monooxygenase-like 29 254 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bva11g02004 466 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 24 462 - -
Bva11g02004 466 SUPERFAMILY FAD/NAD(P)-binding domain 283 452 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02004 Bva-Chr11 16983965 16986745 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02004 - - gmx:100793203 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02004 11 16983965 16986745 Bva11g02004 11 16983965 16986745 ECH