Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01987 ATGGCGGGAGCATTGGCAGCATCAGCCTCTTGCATTTTCTGTCAGATAGCCAATAAATCCACATCCACTTCACTTCTTCACTGcGACGATAAAGTTGTTGCTTTCCAGGATATCAATCCATCTGCCTTCAGGCATTACTTAGTTATTCCTGTGGAGCACATTCCTACAGTTAACGATctcaagagaaaagaagactATTCTTTGGTGAATCACATGTCAGAGGTGGGGAAAATGTTATTACTTAGGGATGCGCCTCTGTCCAAGCACAGATTTGGCTTTCATCAACCTCCACTGAACTCTGTTAATCATTTACATCTTCACTGTTTAGCGCTACCCTATACACCTAGATGGAGATGTATAAAATACTTGTCTTTGGGATCACTTGGTTTTATTGAAACCGAGAAATTGTTGGAGAAGATAAGGCCTTTGCCCATGGATCCCTCAAAGGTATG 452 0.4027 MAGALAASASCIFCQIANKSTSTSLLHCDDKVVAFQDINPSAFRHYLVIPVEHIPTVNDLKRKEDYSLVNHMSEVGKMLLLRDAPLSKHRFGFHQPPLNSVNHLHLHCLALPYTPRWRCIKYLSLGSLGFIETEKLLEKIRPLPMDPSKV 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01987 150 Pfam Scavenger mRNA decapping enzyme C-term binding 10 116 - -
Bva11g01987 150 ProSiteProfiles HIT domain profile. 12 118 IPR011146 GO:0003824
Bva11g01987 150 PRINTS Histidine triad family signature 12 28 IPR001310 -
Bva11g01987 150 PRINTS Histidine triad family signature 33 51 IPR001310 -
Bva11g01987 150 PRINTS Histidine triad family signature 99 109 IPR001310 -
Bva11g01987 150 Gene3D - 2 114 IPR036265 -
Bva11g01987 150 PANTHER HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 3 6 141 - -
Bva11g01987 150 SUPERFAMILY HIT-like 8 130 IPR036265 -
Bva11g01987 150 PANTHER APRATAXIN-RELATED 6 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01987 Bva-Chr11 16898606 16900982 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01987 K22966 - jre:108985353 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01987 11 16898606 16900982 Bva11g01987 11 16898606 16900982 ECH