Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01914 ATGGATCCATTATCAGCAATTAGCGAAGAACTAGCGGAGATCGATGGACAGATCACTGACATTTTCCGCAATTTATCAAATGGGTTTCAAAAATTGGAGAAGATTAAAGATTCACATAGGCAGAGCAGGCAGTTGGAAGAGCTTACAGAAAAAATGCGAGAGTGTAAGCGGCTCATCAAAGATTTCGATAAAGAAGTTAAGGCCTTGGAGGGTAGAAATGATAGAGAAACCAACAGAATGCTGAATGAGAAAAAACAGTCAATGATCAAAGAGTTGAATTCATATGTTGCTCTTAAAAAGCAGTATGCTACAAATATTGAGAATAAGCGAATTCAGCTCTTTGAGGGGCCCAATGAAGGTTATGTAGAAGATAATGGCTTGCTAGCTTCATCTATGACAAATCAACAACTAGTCGATCATGGCAATCAGATGATGGATGAGACTGATCAAGCCATTGAGAGGGGAAAGAAGGTTGTTCAAGAAACCATAAATGTCGGAACTGAGACTGCAGCTGCTCTTAAGGCTCAGACGGATCAAATGAGCAGAATTGTCAATGAGCTGGATTCTATCCATTTCTCGTTAAAGAAAGCCTCTCAACTAGTCAAGGAACTCGGTAGGCAGGTTGCTACTGACAAATGTATAATGGCATTACTTGTTCTTATTGTGATTGGAGTGATAGCCATAATTATTGTAAAGCTGGTGCATCCAAACAACAAGGACATTCGCGATATTCCAGGATTAGCCCCTCCAGTCATGAACCGAAGGCTGCTTTCTTTTAGTTG 782 0.4028 MDPLSAISEELAEIDGQITDIFRNLSNGFQKLEKIKDSHRQSRQLEELTEKMRECKRLIKDFDKEVKALEGRNDRETNRMLNEKKQSMIKELNSYVALKKQYATNIENKRIQLFEGPNEGYVEDNGLLASSMTNQQLVDHGNQMMDETDQAIERGKKVVQETINVGTETAAALKAQTDQMSRIVNELDSIHFSLKKASQLVKELGRQVATDKCIMALLVLIVIGVIAIIIVKLVHPNNKDIRDIPGLAPPVMNRRLLSFS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01914 260 CDD SNARE_SNAP25N_23N_29N_SEC9N 139 203 IPR044766 GO:0005484|GO:0031201
Bva11g01914 260 Gene3D - 133 212 - -
Bva11g01914 260 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 1 250 - -
Bva11g01914 260 Coils Coil 38 86 - -
Bva11g01914 260 SMART tSNARE_6 137 204 IPR000727 -
Bva11g01914 260 Pfam Sec20 150 225 IPR005606 GO:0005484|GO:0006890
Bva11g01914 260 SUPERFAMILY SNARE fusion complex 132 205 - -
Bva11g01914 260 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 142 204 IPR000727 -
Bva11g01914 260 PANTHER NOVEL PLANT SNARE 11 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01914 Bva-Chr11 16518696 16522630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01914 K08494 - gmx:100786429 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01914 11 16518696 16522630 Bva11g01914 11 16518696 16522630 ECH