Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01911 ATGGAGGATATGATCAAAGGCTTGGTTGGTGTTGCTCTTGGTCGAGTCGACAATTATGAAGAAGAACAACGGAACTCACAGTCCCGTGATGAACGATCCAGATCCACTTGGTCTGAgGTTGTCTCCGGTGATCGGGAAAATAATGAAGGAAGAAGCAGAGGTGATCGCAGACCTGGCTACAGTCCAATTCAGGGGAGAAGAGAgGATCAATATCTTCCGGATCAGGAGCGGTGGGAAGTAGAAAGTTCGAGGACTTCGAACAGACCCTATAAGGAACAATATCTTCCAGAGCAGGAAGGGTGGGAAGGCGAAAATCTGAGTACTTCAAAAATACCCCAGAAGtTAGACGGAGATAATGATGATGGATGGCAGACTGTTGGCAAAAAACCTCCGAGGAAGCAGCACAAGGTTCTAAAGGATCAATGGCGTGGTTATAAACGAAATCCTAGTGAGCAAGAATACTCTAATGATGTTGAAATTGATGCAAGTATAGAGCCCTCAGAAGATGAACTAGCTGATCTGTCACAAGCATGCAACAAACTCTGGGATCTTGATTTAAATCGTCTGGTACCCGGCAAGGACTATGAAATTGACTGTGGGGAAGGGAAAAAGGTTTTCCAAAAGGAAGACATGGCACAAGGGAACTTGTTTAATTGGGTTAGTGATGACGTATTCAGAAAGCCTACGTTTTCTCGTTTCTGTTCACTCTTGGATAATTACAACCCAAATGAAGGATACAAGGAAGTTGTCTCATCTGAAGAGAGGCAAGAGCAAGCTGCTTTCATAGAAGAAATTAGTAGAACAGCACCATTTAAATATCTTCACAAGTATCTAGCATCCAAGGGTATCGCATCAGGGACCTACCAAGATTTCAAAAGAATGATGACCTGTCTGTGGTTTGACCTTTATGGTCGAGGTGGTACTTCTGGTTCCTCTTCTGCTTTTGAACATGTTTTTGTTGGAGAAATCAAACAACGTGGTGAAGGAGAAGTTTCTGGCTTTCATAACTGGCTTCAGTTTTACCTTGAAGAAGCAAAAGGGACGGTTGATTATCAAGGTTATATCTTCCCCCGTCGTCGGGGACAAATTCCAGACTCTGAAACCCAGCTACTCACAATTCAGTTTGAATGGAATGGTGTTCTCAAATCTGTATCTAGCACATTGGTTGGAGTGAGCCCAGAATTCGAAATTGCTTTGTATACACTATGTTTCTATGTGGGTAGGGAGGATAACGATGTTCAACTTGGTCCATATGCAGTTAATATCAAGTGCTATCGCTTTGGAGACCGAATAGGATCTGTCTACCCCATTACtgatagtta 1322 0.4274 MEDMIKGLVGVALGRVDNYEEEQRNSQSRDERSRSTWSEVVSGDRENNEGRSRGDRRPGYSPIQGRREDQYLPDQERWEVESSRTSNRPYKEQYLPEQEGWEGENLSTSKIPQKLDGDNDDGWQTVGKKPPRKQHKVLKDQWRGYKRNPSEQEYSNDVEIDASIEPSEDELADLSQACNKLWDLDLNRLVPGKDYEIDCGEGKKVFQKEDMAQGNLFNWVSDDVFRKPTFSRFCSLLDNYNPNEGYKEVVSSEERQEQAAFIEEISRTAPFKYLHKYLASKGIASGTYQDFKRMMTCLWFDLYGRGGTSGSSSAFEHVFVGEIKQRGEGEVSGFHNWLQFYLEEAKGTVDYQGYIFPRRRGQIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFYVGREDNDVQLGPYAVNIKCYRFGDRIGSVYPITDS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01911 440 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 170 440 IPR018998 GO:0004521
Bva11g01911 440 PANTHER PLACENTAL PROTEIN 11-RELATED 133 439 IPR039787 GO:0004521
Bva11g01911 440 SUPERFAMILY EndoU-like 172 438 IPR037227 -
Bva11g01911 440 MobiDBLite consensus disorder prediction 16 134 - -
Bva11g01911 440 Pfam Endoribonuclease XendoU 173 436 IPR018998 GO:0004521
Bva11g01911 440 MobiDBLite consensus disorder prediction 114 128 - -
Bva11g01911 440 CDD XendoU 170 436 IPR018998 GO:0004521
Bva11g01911 440 MobiDBLite consensus disorder prediction 17 86 - -
Bva11g01911 440 PANTHER - 133 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01911 Bva-Chr11 16502971 16506904 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01911 K14648 - jre:108991590 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01911 11 16502971 16506904 Bva11g01911 11 16502971 16506904 ECH