Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01907 ATGGCGGAATCGATCGAGTTGCCAAGTCGGTTAGCCATCCTTCCTTTCATGAACAAGGTCCTCTTACCAGGCGCAATCGTCAGAATTCGTTGCACTTCGCCCAGCAGTGTAAAGTTGGTGGAACAAGAACTTTGGCAGCAAGAAGAGAAGGGATTGATTGGCATCGTGCCAGTACGCGAGGCTGCTGAAATTAAACCACTGAGTACAACATCTCAAGGAACTGATTCGGTTGACCATAgttcaaaaattaaaggtgGTTCATCAGATTCTCATAAGCTCGATATAAAGAGACATATTGTTCGTTGGCATGACAGAGGGGTTGCTGCTCGAGCATTACATTTATCTAGGGGAGTGGAGAAACCTAGTGGAAGGGTCACATATATAGTTGTTCTTGAAGGTTTGTGCAGATTCAGTGTCCAGGAACTAAGCACAAGAGGAACATACCATACTGCCAGGATCTCTCCCTTAGAGCTGACTAAGACTGAGATGGAACAAATTGAACAAGATCCAGATTTCTTAATGTTGTCTCGCCAATTCAAAGCAACTGCCATGGAGCTTATTTCTGTTTTGGAGCAGaaacaaaaaactgGTGGAAGGACCAAAGTTCTTTTGGAGACAGTTCCAGTTCATAAGTTGGCTGATATATTTGTTGCTAGCTTCGAGATAAGTTTTGAAGAACAGTTATCTATGTTGGATTTGGTTGATCCTAAAGGAAGGCTTTCAAAAGCAACTGAGTTAGTTGATAGGCACTTACAGTCAATACGTGTAGCTgagaaaattacacaaaaggTTGAAGGACAATTGTCAAAATCACAGAAAGAATTTCTTCTGCGCCAACAGATGAGAGCTATTAAAGAGGAACTTGGTGATAATGATGACAATGAGGATGAAGTAGTTGCCCTTGAAAGAAAGTTGCAAAGTGCCGGAATGCCACAGAATATTTGGAAGCATGCACACAGGGAGTTAAGgagaattaaaaaaatgcagcCTCAGCAACCTGGCTATAACAGTTCTTTTGTTTACCTGGAGCTTCTTTCTGATCTGCCTTGGCGGAAGGCCAGTGAAGAGCATGAATTGGACTTACGAGTTGCACAGTATCGGCTTGACCATGATCACTATGGATTAGTGAAGGTCAAGCAACGGATCATTGAATACCTTGCTGTTCGGAAGCTTAAACCAGATGCAAGGGGCCCTGTGTTGTGCTTTGTCGGTCCACCTGGTGTTGGGAAAACATCACTGGCATCTTCTATTGCTGCTGCTTTGGGTAGAAAATTTGTGCGCATATCCCTTGGTGGCGTCAAAGATGAGGCTGATATTAGAGGACATAGGAGAACATACGTTGGAAGCATGCCCGGGCGCCTTATTGAGGGTTTGAAGAGAGTAGCTGTTTGCAATCCCGTCATGTTGCTAGATGAAATTGACAAGACACGGTCAAATGTTCGTGGAGATCCAGCTTCAGCGTTGCTAGAGGTTCTTGATccagaacaaaataaaacattcaaTGATCATTATCTGAATGTTCCATTTGATCTATCCAAGGTGGTTTTTGTGGCAACAGCAAATAGGGTGCAGCCTATTCCTCCGCCACTCCTTGACAGGATGGAGGTCATTGAGCTGCCTGGATATACTGCTGAAGAAAAACTCAGTATAGCCATGCGGCATTTGATTCCAAGAGTTCTGGACCAGCATGGGTTGAGCTCTGAATTGCTTCAGATTCCGGAGGCAGCGGTGAAACTTATTATTCAGAGATATACAAGAGAGGCTGGTGTACGGAATTTAGAGAGGAATTTGGCTGCCTTGGCTCGTGCAGCTGCAGTAAGAGTTGCAGAACAGGAACAAGTGGTTCCACTAAACAAAAGAATGCAGGGACTTGCTACACCACTGCTGGAAAACAGACTTGCTGACAGTGCTGAAGTTGAAATGGAAGTGATATCAATGGGTGTCAATAATCGTGACATTTCAAACACATCCAGGATTGCCTCTTCATTGGTTGTGGATGAAGCTATGCTCGAAAAAGTGCTCGGGCTTCCAAGATATGATGGCAGAGAAGCTGCAGAACGTGTTGCAATCCCTGGTGTCTCTGTTGGGTTGGTTCAGACTGCTTTTGGTGGAAAAGTTCAGTTTGTGGAGGCTACAGCAATGGTGGGGAAGGGTGAATTATATCTCACTGGACAACTTGGTGATGTAATTAAAGAATCGGCTCAGATTGCACTAACATGGgtaAGGGCAAGGGCAACTGATCTTAGGCTGGCTGCTGCAGAGGGGATTAATCTGTTTGAGGGCCGTGACATACACATACATTTTCCTGCTGGTGCTGTACCTAAAGATGGACCCTCAGCAGGTGTAACTTTAGTGACAGCATTAGTATCACTTTTCAGTCAGAAAAGAGTGAGATCAGACACAGCTATGACTGGAGAGATGACATTGAGGGGTGTTGTATTACCTGTTGGTGGTGTCAAGGATAAGGTATTAGCCGCTCATCGAGATGGTATTAAGAGAGTCATCCTGCCTGAAGGGAACTTGAAGGACTTGGTTGAAGTACCATCATCAGTGCTCGCCAATTTGGAGATACTGCTTGCGAAGCGAATGGAAGACGTGTTAGAACATGCTTTTGATGGTGGCTGCCCTTGGAGGCAACATTCAAAATTATG 2651 0.4338 MAESIELPSRLAILPFMNKVLLPGAIVRIRCTSPSSVKLVEQELWQQEEKGLIGIVPVREAAEIKPLSTTSQGTDSVDHSSKIKGGSSDSHKLDIKRHIVRWHDRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISPLELTKTEMEQIEQDPDFLMLSRQFKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDLVDPKGRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDNEDEVVALERKLQSAGMPQNIWKHAHRELRRIKKMQPQQPGYNSSFVYLELLSDLPWRKASEEHELDLRVAQYRLDHDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRISLGGVKDEADIRGHRRTYVGSMPGRLIEGLKRVAVCNPVMLLDEIDKTRSNVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATANRVQPIPPPLLDRMEVIELPGYTAEEKLSIAMRHLIPRVLDQHGLSSELLQIPEAAVKLIIQRYTREAGVRNLERNLAALARAAAVRVAEQEQVVPLNKRMQGLATPLLENRLADSAEVEMEVISMGVNNRDISNTSRIASSLVVDEAMLEKVLGLPRYDGREAAERVAIPGVSVGLVQTAFGGKVQFVEATAMVGKGELYLTGQLGDVIKESAQIALTWVRARATDLRLAAAEGINLFEGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSQKRVRSDTAMTGEMTLRGVVLPVGGVKDKVLAAHRDGIKRVILPEGNLKDLVEVPSSVLANLEILLAKRMEDVLEHAFDGGCPWRQHSKL 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01907 883 Pfam ATPase family associated with various cellular activities (AAA) 400 537 IPR003959 GO:0005524|GO:0016887
Bva11g01907 883 MobiDBLite consensus disorder prediction 66 81 - -
Bva11g01907 883 SMART AAA_5 396 541 IPR003593 -
Bva11g01907 883 Gene3D - 2 157 IPR046336 -
Bva11g01907 883 ProSitePatterns ATP-dependent serine proteases, lon family, serine active site. 776 784 IPR008268 GO:0004176|GO:0004252|GO:0006508
Bva11g01907 883 Hamap Lon protease homolog 2, peroxisomal [LONP2]. 3 883 IPR027501 GO:0004252|GO:0006515
Bva11g01907 883 Pfam ATP-dependent protease La (LON) substrate-binding domain 11 249 IPR003111 -
Bva11g01907 883 ProSiteProfiles Lon N-terminal domain profile. 11 249 IPR003111 -
Bva11g01907 883 Gene3D - 300 348 - -
Bva11g01907 883 MobiDBLite consensus disorder prediction 66 90 - -
Bva11g01907 883 Gene3D - 540 679 - -
Bva11g01907 883 Coils Coil 284 304 - -
Bva11g01907 883 Gene3D - 362 539 IPR027417 -
Bva11g01907 883 ProSiteProfiles Lon proteolytic domain profile. 688 873 IPR008269 GO:0004176|GO:0004252|GO:0006508
Bva11g01907 883 PIRSF Lon_proteas 638 874 IPR004815 GO:0004176|GO:0005524|GO:0006508
Bva11g01907 883 PIRSF Lon_proteas 1 625 IPR004815 GO:0004176|GO:0005524|GO:0006508
Bva11g01907 883 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 773 792 - -
Bva11g01907 883 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 691 707 - -
Bva11g01907 883 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 803 822 - -
Bva11g01907 883 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 404 423 - -
Bva11g01907 883 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 826 844 - -
Bva11g01907 883 SUPERFAMILY Ribosomal protein S5 domain 2-like 691 871 IPR020568 -
Bva11g01907 883 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 1 883 - -
Bva11g01907 883 Gene3D - 690 875 IPR014721 -
Bva11g01907 883 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 1 883 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Bva11g01907 883 TIGRFAM lon: endopeptidase La 13 871 IPR004815 GO:0004176|GO:0005524|GO:0006508
Bva11g01907 883 SUPERFAMILY PUA domain-like 10 248 IPR015947 -
Bva11g01907 883 SMART lon_5 10 249 IPR003111 -
Bva11g01907 883 Pfam Lon protease (S16) C-terminal proteolytic domain 665 871 IPR008269 GO:0004176|GO:0004252|GO:0006508
Bva11g01907 883 CDD AAA 381 542 - -
Bva11g01907 883 Gene3D - 168 292 - -
Bva11g01907 883 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 348 615 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01907 Bva-Chr11 16461831 16470037 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01907 K01338 - gmx:100796563 1489.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01907 11 16461831 16470037 Bva11g01907 11 16461831 16470037 ECH