Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01781 ATGAAGAGCAAAACGCTAAGAGGAAATTGGAGCTTGAGGACGAAGAAGTTCGAATTAccatctctcttcttcatatgcacctttttctttctagctGGATTCTTCGGTTCCAGTTTTTTCTCCCAGTTTCCGGATGATGTATACGGTGTGAGATCGAGAGCGACGTTCCTCGATTCTACGACGGTAGAGACGGAATACAACTTGTTGACATCTGGAGAGTCCGGTGATAATTCCATTACTTCAATTCCTTTCCAGGTTTTGAGCTGGAAACCACGTGCTCTATATTTTCCTAATTTTGCAAGTGCAGAACAATGTGAAACCATAATTGACATCTCAAAGGAAGGCCTCAAACCATCGTCCTTGGCATTACGCAAGGGAGAAACAGAGGAGAATACCAATGGAATTAGAACAAGcTCTGGCATGTTTATAAGTGCTGCTGAGGATAAAACTGGGACTTTGGATGTGATTGAGGAAAAAATTGCCAGAGCCACTAAAGTTCCCAGGAATCATGGAGAGGCATTCAATATCTTGCGCTACGAGATTGGACAGAAGTATGCTTCTCATTATGATGCATTCAACCCCGCGGAATATGGTCCACAAAAGAGTCAAAGGGTATCTCTGAACTCGGAAGCCACAATAACGCGTCCAAGAAAACCCAAGATGGCTTCTTTTCTGCTGTATTTATCTGATGTTCCGGAAGGTGGAGAGACCGTGTTTCCGTTTGAGAATGGCTTGAACATGGACGGTAGCTACAGTTACGAGGACTGTATTGGTTTAAGGGTGAGGCCACGACGAGGGGATggacttctattttattcgtTGTTTCCTAATGGAACAATTGATCCGACGTCACTCCATGGGAGCTGCCCTGTAAtcaaaggacaaaaatgggtGGCTACAAAGTGGATAAGGGATCAAGAACTAGATGATAACGGGGTCTG 941 0.4102 MKSKTLRGNWSLRTKKFELPSLFFICTFFFLAGFFGSSFFSQFPDDVYGVRSRATFLDSTTVETEYNLLTSGESGDNSITSIPFQVLSWKPRALYFPNFASAEQCETIIDISKEGLKPSSLALRKGETEENTNGIRTSSGMFISAAEDKTGTLDVIEEKIARATKVPRNHGEAFNILRYEIGQKYASHYDAFNPAEYGPQKSQRMASFLLYLSDVPEGGETVFPFENGLNMDGSYSYEDCIGLRVRPRRGDGLLFYSLFPNGTIDPTSLHGSCPVIKGQKWVATKWIRDQELDDNGV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01781 297 Pfam 2OG-Fe(II) oxygenase superfamily 175 288 IPR044862 -
Bva11g01781 297 PANTHER TYPE 1 PROLY 4-HYDROXYLASE 8 294 - -
Bva11g01781 297 Gene3D q2cbj1_9rhob like domain 84 288 - -
Bva11g01781 297 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 169 289 IPR005123 -
Bva11g01781 297 SMART p4hc 91 288 IPR006620 GO:0005506|GO:0016705|GO:0031418
Bva11g01781 297 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 8 294 IPR045054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01781 Bva-Chr11 15817696 15824200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01781 K00472 - gmx:100776115 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00545 08 2797349 2802308 Bva11g01781 11 15817696 15824200 ECH
Bva11g01781 11 15817696 15824200 Bva11g01781 11 15817696 15824200 ECH