Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01402 ATGGTCCCCAAACCCATCATATCCACAGCACCACCATCATCCCTCGCAACTCCTCATGTGCCTATCTTTAACGTCTCCTCTGTCAAAACTGGAGAAAAAACCCAAGTACAGAACGTCAAAAGCACCTCAACACAAACAGTGACTCCTCCACCACCCCTCAACACCACCCAAAAGCCAATCTCGGAGGCCCCAGCATCTGCAGTCAAGAAGACACCGGTGATTTCAGGGCAAAGGGAAGGGAGGAGACAAGCAGAATTATCTATACCTGCATTGATTTTCAATGCATTTgataatatcatcaacaacTTCATAGACCCTCCAGTGAAGTCTTCTGTTGACCCAAGAAAAGTCCTTTCTCAGAATTTTGCTCCTGTTGATGAGCTACCTCCAACCGAGTGTGAAGTCATAGAAGGATCACTACCACCTTGTCTTGATGGAGCTTATATCCGCAATGGCCCTAACCCACATTTCCTTCCTCGGGGACCTTACCACCTCTTTGATGGTGATGGCATGCTTCACTCTATTCGAATTTCTCAAGGTAAAGCAACACTCTGCAGCAGATACGTTAAGACCTACAAATATAACATTGAAAATGAAGCAGGGTACCCTCTTATCCCCAGTGTGTTCTCTGGATTCAATGGCCTTGTTGCCTGTGCAGCTCGTGGTTCTCTAACTGCTGCTCGAGTGCTAACGGGTCAATGCAATCCCATCAATGGCATTGGCCTAGCAAACACAAGTTTGGCTCTCATTGGCAACCGTCTGTTTGCACTGGGAGAGTCTGATCTTCCTTATATGGTGAAATTGACTTCAAATGGAGATATTCAAACTCTGGGTCGACATGATTTTGATGGCAAACTTGCCATAAGCATGACTGCTCACCCCAAGATAGACCCTGAAACTGGTGAGGCCTTTGCTTTTCGTTATGGCCCTGTGCCTCCTTTCCTCACCTATTTCCGCTTCGATTCAAATGGAAACAAACAACCAGATGTGCCCATTTTCTCCATGATCCGTCCCTCATTCCTCCATGATTTCGCTATCACCAAAAAATACGCCATTTTTGCTGACATTCAAATAGGAATTAACCCAATTGAGATGATCGCCGGTGGCTCCCCTATTGGTGCAGACCTATCGAAAGTTCCCAGAATCGGAGTCGTTCCTCGATACGCCACAGACGAGTCCCAAATTAAGTGGTTCGATGTGCCAGGATTCAACATTATCCATGCCATTAACGCTTGGGATGAAGATGATGGAAATTCAATAGTCATAGTAGCACCCAACATTTTATCAGTGGAGCACACGCTAGAGAGAATGGAACTCCTCCATGCTATGGTAGAGAAGGTGAAGGTCGACCTCGTAACTGGGACTGTCACAAGGCAACCAATTTCAGCTAGAAACCTCGACTTTGGGGTAATTAATCAAGCATTTGTTGGGCGAAAGAACAAATTCGTATATGCAGCTGTTGGCGACCCGATGCCCAAGATTTCAGGAGTGGTAAAGCTGGATGTGTCTAATGCGAAGGAACGCCGGGACTGCACGGTGGCTTGCATGATGTACGGAGAAGGGTGTTATGGGGGTGAGCCAATTTTTGTGGCAAGGGAGCCAGAGAACCCAGAAGCAGAGGAAGACGATGGGTATCTGGTGTCTTACGTGCACGATGAGAACAAGGGGGAGTCAAGGTTCTTGGTGATGGATGCTAAGTCGCCCGAACTTGAAATAGTGGCGGCGGTGAAGCTTCCCCGACGAGTGCCGTACGGTCTTCATGGACTCTTTGTGAGGGAAAGTAACCTCAGGAGGCTATA 1799 0.4703 MVPKPIISTAPPSSLATPHVPIFNVSSVKTGEKTQVQNVKSTSTQTVTPPPPLNTTQKPISEAPASAVKKTPVISGQREGRRQAELSIPALIFNAFDNIINNFIDPPVKSSVDPRKVLSQNFAPVDELPPTECEVIEGSLPPCLDGAYIRNGPNPHFLPRGPYHLFDGDGMLHSIRISQGKATLCSRYVKTYKYNIENEAGYPLIPSVFSGFNGLVACAARGSLTAARVLTGQCNPINGIGLANTSLALIGNRLFALGESDLPYMVKLTSNGDIQTLGRHDFDGKLAISMTAHPKIDPETGEAFAFRYGPVPPFLTYFRFDSNGNKQPDVPIFSMIRPSFLHDFAITKKYAIFADIQIGINPIEMIAGGSPIGADLSKVPRIGVVPRYATDESQIKWFDVPGFNIIHAINAWDEDDGNSIVIVAPNILSVEHTLERMELLHAMVEKVKVDLVTGTVTRQPISARNLDFGVINQAFVGRKNKFVYAAVGDPMPKISGVVKLDVSNAKERRDCTVACMMYGEGCYGGEPIFVAREPENPEAEEDDGYLVSYVHDENKGESRFLVMDAKSPELEIVAAVKLPRRVPYGLHGLFVRESNLRRL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01402 599 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 22 597 - -
Bva11g01402 599 PANTHER BETA-CAROTENE DIOXYGENASE 22 597 IPR004294 GO:0016702
Bva11g01402 599 MobiDBLite consensus disorder prediction 31 51 - -
Bva11g01402 599 MobiDBLite consensus disorder prediction 31 80 - -
Bva11g01402 599 Pfam Retinal pigment epithelial membrane protein 124 591 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01402 Bva-Chr11 13902126 13904094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01402 K09840 - tcc:18606899 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01402 11 13902126 13904094 Bva11g01402 11 13902126 13904094 ECH