Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01393 ATGTATTTTTCCGACGACGAGGACGAGAATTTAGCTCACTTTCTGGAATCGGAGGTTCTCTCTGAGATTTCTGATCAGgaaatagaaaatgtgAAGGAACCCAAAGCAAAGAGACAGAGAATAGTAGTTGAGGAGGCTGAAAATGCAAAGGAAGAACTTAAAGAAAGTTGTACTTCATCATCGGGGCTGAAGAATGAGAGTATCATCGAAGTGAAGCCGAGGAGGATTGAGACTGGATTTTTCAGTAAAATCCCTCCTGAACTTTTCCATAATATCCTTAAATTTCTCTCTTCCGAGGACCTTATTTCATGCTCTTTGGTCTGTACATTTCTAAGCCACGCTGCATCGGATGAAGCACTATGGCGTCGCTTGTACTGTATGCGTTGGGGTCTTCTTCCCCCTACCAGGAAGCTGCGGGAATGCCCATGGAAAAAGTTATACATTCAGCGTGACGGAGAGGACATGGTTGAACTCGTGAGGAACTGCCCGAATGAGTTTAAAGAGTATTACATTCAAATGCAAGCAGCTAAGCGAGGCCAAGCACCTCTTCCTTCACAGTTGAAAGATGATAGCTTAATTCTTGACAAAACATTAGCTGATCAAGTGTCAATGTGGAGAAGTAGCATGGGTCTCAGTGATACAGTAGTAACTGATCATGCTTGTTCTGGAGAAACATGTTCATACCACCAAATGGGAGATGTATTTATATGTGAGAAGACGGGACAGGTTCATGtaTGTGATGACACATGTAGAGAAGTTATCATGGATCCCAACACTGAGCTTTTGGTCTGTACAATATCAGGGCACTGTTTTGATAGATTACTATCACCAGCTGAAATGGAGCCAGATGCTGAGCAGCAACAAGGTGCTGTGACAGATGAGGCAGAACCCTTCATGGGATCTGGCCGTTTTGCACGAGCTTATTTACTGGGATATAATTGTGCTGATGAAAAGGAGCTCGAAGCTACTCTGAGGTTTTGCTA 983 0.4293 MYFSDDEDENLAHFLESEVLSEISDQEIENVKEPKAKRQRIVVEEAENAKEELKESCTSSSGLKNESIIEVKPRRIETGFFSKIPPELFHNILKFLSSEDLISCSLVCTFLSHAASDEALWRRLYCMRWGLLPPTRKLRECPWKKLYIQRDGEDMVELVRNCPNEFKEYYIQMQAAKRGQAPLPSQLKDDSLILDKTLADQVSMWRSSMGLSDTVVTDHACSGETCSYHQMGDVFICEKTGQVHVCDDTCREVIMDPNTELLVCTISGHCFDRLLSPAEMEPDAEQQQGAVTDEAEPFMGSGRFARAYLLGYNCADEKELEATLRFC 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01393 327 SUPERFAMILY F-box domain 70 150 IPR036047 GO:0005515
Bva11g01393 327 Pfam UL92 family 225 293 IPR004289 -
Bva11g01393 327 PANTHER F-BOX ONLY PROTEIN 3 271 327 - -
Bva11g01393 327 PANTHER F-BOX ONLY PROTEIN 3 72 270 - -
Bva11g01393 327 Coils Coil 36 56 - -
Bva11g01393 327 Gene3D - 66 155 - -
Bva11g01393 327 ProSiteProfiles F-box domain profile. 78 124 IPR001810 GO:0005515
Bva11g01393 327 Pfam F-box-like 82 126 IPR001810 GO:0005515
Bva11g01393 327 SMART fbox_2 84 124 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01393 Bva-Chr11 13847906 13851575 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01393 - - gmx:100778591 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01393 11 13847906 13851575 Bva11g01393 11 13847906 13851575 ECH