Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva11g01392 | ATGGGAGGTGGAAAGGACAAGCATGATGAGTCTGATAAAGGAGTTTTCTCTCATCTAGCTCAAGGGTTAGCTCATGGTGCACATGGGTATCCTCCTGGGGCATACCCTCCACATCAGGGGTACCCACCTCAGGGATACCCTCCCCAACATGGTTATCCACCTCAGGGATACCCTCCCCAACATGGTTATCCACCTCAGGGATACCCGCCTCAACATGGTTATCCACCTCATGGATACCCACCTCAACAAGGTTATCCCCCAGCAGGCTATCCTCCTGGCGCGTACCCACCAACTGGTTATCCTGGTCCCTCCGCTCCCCATGCTGCAGGGCATCATGGTGGTCTCGGGGGAATAATTGCTGGGGGGGCTGCTGCAGCCGCTGCGGCATATGGTGCTCACCATCTCTCCCATGGCCACTATGGGCACGGTGCTCCTCATATGGGCCATGGGAAATTCAAGCACGGCAAGTTCAAGCATGGGAAGTTCGGCAAGCATGGGAAGTTTAAGCATGGGAAGTTCGGCAAGCATGGTCTCTTCAGGAAGTGGAAGTG | 551 | 0.5535 | MGGGKDKHDESDKGVFSHLAQGLAHGAHGYPPGAYPPHQGYPPQGYPPQHGYPPQGYPPQHGYPPQGYPPQHGYPPHGYPPQQGYPPAGYPPGAYPPTGYPGPSAPHAAGHHGGLGGIIAGGAAAAAAAYGAHHLSHGHYGHGAPHMGHGKFKHGKFKHGKFGKHGKFKHGKFGKHGLFRKWK | 183 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva11g01392 | 183 | PANTHER | DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G04290)-RELATED | 1 | 80 | - | - | |
| Bva11g01392 | 183 | PANTHER | DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G04290)-RELATED | 56 | 183 | - | - | |
| Bva11g01392 | 183 | PANTHER | DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G04290)-RELATED | 1 | 80 | - | - | |
| Bva11g01392 | 183 | PANTHER | DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G04290)-RELATED | 56 | 183 | - | - | |
| Bva11g01392 | 183 | MobiDBLite | consensus disorder prediction | 1 | 108 | - | - | |
| Bva11g01392 | 183 | Pfam | XYPPX repeat (two copies) | 73 | 82 | IPR006031 | - | |
| Bva11g01392 | 183 | Pfam | XYPPX repeat (two copies) | 62 | 71 | IPR006031 | - | |
| Bva11g01392 | 183 | Pfam | XYPPX repeat (two copies) | 34 | 49 | IPR006031 | - | |
| Bva11g01392 | 183 | Pfam | XYPPX repeat (two copies) | 51 | 60 | IPR006031 | - | |
| Bva11g01392 | 183 | Pfam | XYPPX repeat (two copies) | 84 | 97 | IPR006031 | - | |
| Bva11g01392 | 183 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Bva11g01392 | 183 | MobiDBLite | consensus disorder prediction | 35 | 103 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva11g01392 | Bva-Chr11 | 13844657 | 13846615 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva11g01392 | - | - | cmos:111447772 | 48.1358 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva11g01392 | 11 | 13844657 | 13846615 | Bva11g01392 | 11 | 13844657 | 13846615 | ECH |