Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01388 ATGGGCTCCCAGGGCGGATTCGGTCAATCCAAGGAGTTCCTTGATCTGGTCAAGTCCATTGGTGAAACTCGATCCAAAGCCGAGGAAGACAGAATTGTCCTCCATGAGATCGAAACCCTCAAGCGTCGCATCATTGAACCTGACATTCCTAagagaaagatgaaagaaTACATCATCCGTCTCGTTTATGTGGAGATGCTTGGCCATGATGCATCATTTGGCTACATCCACGCCGTAAAGATGACCCATGATGACAGTCTCCTCCTTAAACGAACTGGGTATTTGGCTGTTACTCTTTTCTTGAACGAAGACCACGACTTGATTATTCTCATTGTCAATACCATTCAGAAGGACCTCAAGTCTGATAACTATTTGGTCGTTTGTGCTGCCCTTAATGCCGTTTGTAAGTTGATTAATGAGGAGACTATCCCAGCTGTGCTGCCACAGGTGATCGAGCTGTTGGGTCATTCCAAAGAGGCCGTGCGGAAGAAGGCTATCATGGCCCTTCATCGCTTCTACCAGAAATCACCTTCTTCCGTGTCCCATTTGATTTCCAATTTCCGTAAGAAATTGTGTGATAATGATCCTGGGGTAATGGGTGCCACACTATGCCCTCTTTTTGATCTCATAACGGTTGACGTTAATTCTTGCAAGGATCTCGTCGTCAGTTTTGTGAGCATTCTTAAACAAGTAGCGGAGCGCAGGTTGCCAAAGAGCTACGATTATCATCAGATGCCAGCTCCATTCATTcagATTAAGTTGCTGAAAATCCTGGCATTGTTGGGAAGTGGCGATAAGCAAGCAAGCGAAAACATGTATACTGTTATCGGTGATATAATCAGGAAGTCCGATTCATCGAGTAATATAGGGAATGCTGTTCTTTATGAGTGCATATGCTGTGTCTCTTCCATATATCCCAATGCCAAGTTATTGGAGGCCGCTGCAGATGTTATCGCGAGATTTTTGAAGAGTGACAGTCATAATCTCAAGTATATGGGCATTGATGCCCTTGGTCGGCTAATAAAGTTAAGTCCGGAAATTGCCGAACAGCATCAACTAGCCGTGATTGACTGCTTAGAGGACCCCGATGACACTTTGAAGCGAAAAACATTTGAACTGCTATACAAAATGACTAAGTCATCCAATGTGGAAGTGATTGTTGACCGAATGATTGATTACATGATTAATATTAGCGATGATCATTATAAAACCGATATAGCATCTCGATGTGTAGAACTTGCCGAGCAATTTGCACCAAGTAATCATTGGTTTATCCAGACCATGAATAAAGTTTTTGAGCATGCCGGAGATCTTGTGAATATTAAAGTGGCACATAATTTGATGCGATTGATTGCGGAAGGATTTGGAGAGGATGATGATGCTGCAGATAGTCAATTGAGATCATCTGCTGTTGAGTCATATTTGCGCATTATTGGAGAGCCAAAGCTTCCATCTGTATTTCTTCAGGTCATTTGTTGGGTTCTTGGGGAGTATGGCACAGCTGATGGGAAGTATTCTGCTTCCTATATAACTGGGAAGTTGTGTGATGTGGCGGAGGCGTATTCTAATGATGAAACAGTGAAGGCATATGCAATTTCAGCACTGATGAAAATCTATGCATTTGAAATATCAGCAAGGAGGAAAGTGGATATTTTACCTGAGTGTCAATCATTGGTTGAAGAGTTATTAGCGTCTCACTCTACAGATTTGCAGCAGCGTGCGTATGAATTGCAAGCTCTTGTTTCTTTGGATGCACAGGCTGTTCAAAGTATCTTGCCACAAGATGCAAGTTGTGAAGACATTGAGGTGGATAAGGACCTTTCATTCCTAAACGGTTATGTCCAACAGGCTCTAGAAAGGGGTGCTCAGCCGTACATTCCTGAGGATGTGCGCAGGGGAATGGAGGATATGAGCAACTTCAGCAGCCAAAATCAACATGAATCATCAACGCATGGTCTGAGATTTGAGGCGTACGAACTTCCAAAGCCTCCAGTGCCAACAAAAGTTGCTCCAGTTTCACTTGCATCCTCAGCTGACCTTGTTCCAGTATCTGAGGCATTCTATTCTAGGGAGACCAACCAGGGCTCATCGGTGGCATCTGCATCAGAGGCAGGATCATCAGAACTCAAGCTACGGCTTGATGGTGTTCAGAGGAAGTGGGGTAGGCCAACTTATTCAGCATCATCTACCTCAGATTCTGCTTCTCAAAAATCAGTGAATGGGATGAGTCAAGTGGATGGTACAAGTGCTGTTAGTTCAAAAGTACGTGATAGTTATGATTCAAAAAAGCCACTGCAGATTGATCCAGAAAAGCAGAAGCTTGCTGCTTCATTGTTTGGGGGCTCAACTAAACCCGAGAAAAGACCATCAGCTAGCAATGAGGTTCCAAAGGCTGGTGCAAATGCTGCAGATCGAACTCAGGGATCAAAGGTAGCAGCTGTAACCGTTGAAGTAGCTGGGGAGAAAACGAATGATCAACCTCCTCCAGATTTGCTTGACTTGAGTGAATCAACTGTCACCAACACTCCTCCCTCTGTGGACCCATTCAAGCAATTGGAAGGACTTCTTGACCCAAGCCTTAGTTCGACAACTGATCATAGTGTGAGTGCTGCTTCGAAGGCACCTGATATTATGGCACTCTATGCAGACACAACCGCAAGTGGGCAAAGTGGCAGTGGTGGTTATTCTATCCCTCCAAGTGGGGATAGTGTGAATCTTATATCTGAGTTGTCAAATGCAGCTGTTCTGGCTAGTCCCGAATCTCCATTGCAATCTGTTAAGGGTCCAAACCCGAAAGATTCTTTGGAGAAGGATGCACTAGTGAGGCAGATGGGTGTGAACCCAACCAGTCAGAATCCCAACTTGTTCAGAGACTTGTTTGGGTA 2885 0.4416 MGSQGGFGQSKEFLDLVKSIGETRSKAEEDRIVLHEIETLKRRIIEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDSLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCKLINEETIPAVLPQVIELLGHSKEAVRKKAIMALHRFYQKSPSSVSHLISNFRKKLCDNDPGVMGATLCPLFDLITVDVNSCKDLVVSFVSILKQVAERRLPKSYDYHQMPAPFIQIKLLKILALLGSGDKQASENMYTVIGDIIRKSDSSSNIGNAVLYECICCVSSIYPNAKLLEAAADVIARFLKSDSHNLKYMGIDALGRLIKLSPEIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIDYMINISDDHYKTDIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDAADSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKYSASYITGKLCDVAEAYSNDETVKAYAISALMKIYAFEISARRKVDILPECQSLVEELLASHSTDLQQRAYELQALVSLDAQAVQSILPQDASCEDIEVDKDLSFLNGYVQQALERGAQPYIPEDVRRGMEDMSNFSSQNQHESSTHGLRFEAYELPKPPVPTKVAPVSLASSADLVPVSEAFYSRETNQGSSVASASEAGSSELKLRLDGVQRKWGRPTYSASSTSDSASQKSVNGMSQVDGTSAVSSKVRDSYDSKKPLQIDPEKQKLAASLFGGSTKPEKRPSASNEVPKAGANAADRTQGSKVAAVTVEVAGEKTNDQPPPDLLDLSESTVTNTPPSVDPFKQLEGLLDPSLSSTTDHSVSAASKAPDIMALYADTTASGQSGSGGYSIPPSGDSVNLISELSNAAVLASPESPLQSVKGPNPKDSLEKDALVRQMGVNPTSQNPNLFRDLFG 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01388 961 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 4 957 - -
Bva11g01388 961 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 4 957 - -
Bva11g01388 961 MobiDBLite consensus disorder prediction 830 845 - -
Bva11g01388 961 PIRSF AP4_epsilon 1 663 IPR017109 GO:0015031|GO:0030124
Bva11g01388 961 PIRSF AP4_epsilon 911 961 IPR017109 GO:0015031|GO:0030124
Bva11g01388 961 PIRSF AP4_epsilon 633 826 IPR017109 GO:0015031|GO:0030124
Bva11g01388 961 MobiDBLite consensus disorder prediction 722 755 - -
Bva11g01388 961 SUPERFAMILY ARM repeat 27 625 IPR016024 -
Bva11g01388 961 MobiDBLite consensus disorder prediction 722 845 - -
Bva11g01388 961 Pfam Adaptin N terminal region 49 583 IPR002553 GO:0006886|GO:0016192|GO:0030117
Bva11g01388 961 Gene3D - 3 595 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01388 Bva-Chr11 13807711 13814160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01388 K12400 - gmx:100806914 1507.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01388 11 13807711 13814160 Bva11g01388 11 13807711 13814160 ECH