Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01387 ATGGCGACTGAATCTGGCGTTAAAGGTCCCTCAAGTTCGTCGTCAAATGCTGGGGAATCGTACATCGGAAGCTTCATAAGCCTGATTTCCAAGTACGAGATTCGTTACGAGGGTGTTCTGTATTTCCTCAACGTCCAGGATTCTACCATTGGCTTGAAGAACGTTAGGTCTTATGGAACAGAGGGGAGAAGGAAAGATGGTCCACAAGTTCCTCCCAGTGATAAGGTTTATGAATACATTCTTTTCCGAGGAAATGACATCAAGGATTTGCAGGTGAAGTCCCCCTCTTCCTCTTCAAAGCCAGAAGAGAAGATATGTAGTGATCCAGCACCCATGTCTATATA 344 0.4506 MATESGVKGPSSSSSNAGESYIGSFISLISKYEIRYEGVLYFLNVQDSTIGLKNVRSYGTEGRRKDGPQVPPSDKVYEYILFRGNDIKDLQVKSPSSSSKPEEKICSDPAPMSI 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01387 114 Gene3D - 11 97 - -
Bva11g01387 114 PANTHER SCD6 PROTEIN-RELATED 13 112 - -
Bva11g01387 114 CDD LSm14_N 18 92 IPR025609 -
Bva11g01387 114 Pfam Scd6-like Sm domain 21 94 IPR025609 -
Bva11g01387 114 PANTHER DECAPPING 5-LIKE PROTEIN-RELATED 13 112 - -
Bva11g01387 114 SMART LSM14_2 15 114 IPR025609 -
Bva11g01387 114 SUPERFAMILY Sm-like ribonucleoproteins 20 95 IPR010920 -
Bva11g01387 114 MobiDBLite consensus disorder prediction 90 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01387 Bva-Chr11 13802736 13805396 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01387 K18749 - gmx:102669894 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01387 11 13802736 13805396 Bva11g01387 11 13802736 13805396 ECH