Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01379 ATGAGAAAAAGACTAGCTTGCTGCACATGGGACAGGAAAATTAGCAGTGATTTTGATGAACAGGAGAggATTATGATGTACAATGGCCTTGAGAGCTGCATTCTCAATAATCAATCTTATGACGGTGAAAGCAGAACTAGCAGAGGAGATGGATGTATAACCGATtcatttgatgatgatgatgatgactCTACCTGTTCATCGAGCAAAGATGCTTTTGGATCATTCTCTTCAAAATGCTTGACAACAAAAAGGGACGAACTAGGATTGGATGAATGGGAACTCTCAGAAAGTCCCCAACATTTTTACGTCAAAGAGAAGCCTGCTTATGCCATCCAATATGCAGATGTAGAGGCAATGAAAGAGAAGTTTGCAAAGCTGTTGCTAGGAGAAGACGTTACGGGAGGATCGAAGGGCGTCAATACAGCATTAGCACTATCTAATGCCATCACAAACCTAGCAGCAACAGTTTTTGGAGAGTTGTGGAAATTGGAACCCCTAtcagaagaaaggaaaggaaaatggcGAAGAGAAATGGACTGGTTGCTGTCTCCAACCAACCATATGGTGGAGTTGGTTCCCGCTAAGCAAAGTAGCGCCAATGGTGGGATCTTTGAGATAATGACCCCAAAAGCACGTGCAGACATCCACATGAATCTTCCAGCACTTCAGAAGCTGGACTCTATGCTTATTGAGACACTAGATTCAATGGTGAATACTGAGTTTTGGTATGCAGAGGGAGGAAGCCGGGCAGAAGGAAGGAGCACTGATGCACAGCAGAGCAAAAGATGGTGGCTTCCATCGCCCCATGTACCAAAGACTGGACTTTCTGACACTGAAAGAACAAAACTACTGAATCAGGGAAGGCTGGTACAACAAATCTTTAAGGCTGCGAAATCTATCAATGAAAATGTGTTGCTTGAGATGCCTGTGCCAACAATTATAAAGGATGCACTTCGAAAGTCCAGCAAGGCTAATCTGGGAGAGGAACTGCACAAGGTTTTGACAGCTGAAGCAAGGTCTGGAGAAGACATGCTTAAATCCCTCGATTTGAAATCTGAGAATAGTGCCCTTGAGACCATCAACAGATTGGAAGCTGCGATTTTTACATGGAAGGAGAGAAGTATGGAACAAGTTAGCGGCAAAGGCACAGTTCGAACTTCATGGCCTTTCATGAAGGACCTTACGCTGGAGATGGAGAAGATGGAGTCACTGCTGGTACGTGCAGAAACACTTGTACGGCTGCTTAAAGCCAGATATCCAAACCTTCCTCAAACATTTCTTGAAGCTACAAAAATCCAATATGGCAAGGATATTGGGCATTCCATTTTGGAAGCATATTCCAGGGTTCTTGGAAACATGGCCTTCATTATACTGTCTAGAATAGGAGATATATTGCAGGAAGATATTTTAAGCAATCCCAATTCACCAGTGGTGACCAGTTGCTCTCCTGGGTTAAATCTCACTGAAACTTGGGGGATTGGTTCACACATCAGGCAATCACTGCTTGACAAGATGAACAAGGCTGATGGAAACTCTAGCTGTGGGAGTACTTGTGATGTAGAACTTTCTTTTGCTGACACCAAATCAAGCTCTGTAACTGTTACACCAAGTCGCAGTCGAGTTTGGCGCATTGGTAAAGAGGCTCGTAAAAGCGTGTCCCGTCCATTTAACCCTTA 1679 0.4264 MRKRLACCTWDRKISSDFDEQERIMMYNGLESCILNNQSYDGESRTSRGDGCITDSFDDDDDDSTCSSSKDAFGSFSSKCLTTKRDELGLDEWELSESPQHFYVKEKPAYAIQYADVEAMKEKFAKLLLGEDVTGGSKGVNTALALSNAITNLAATVFGELWKLEPLSEERKGKWRREMDWLLSPTNHMVELVPAKQSSANGGIFEIMTPKARADIHMNLPALQKLDSMLIETLDSMVNTEFWYAEGGSRAEGRSTDAQQSKRWWLPSPHVPKTGLSDTERTKLLNQGRLVQQIFKAAKSINENVLLEMPVPTIIKDALRKSSKANLGEELHKVLTAEARSGEDMLKSLDLKSENSALETINRLEAAIFTWKERSMEQVSGKGTVRTSWPFMKDLTLEMEKMESLLVRAETLVRLLKARYPNLPQTFLEATKIQYGKDIGHSILEAYSRVLGNMAFIILSRIGDILQEDILSNPNSPVVTSCSPGLNLTETWGIGSHIRQSLLDKMNKADGNSSCGSTCDVELSFADTKSSSVTVTPSRSRVWRIGKEARKSVSRPFNP 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01379 559 ProSiteProfiles PRONE domain profile. 107 479 IPR005512 GO:0005085
Bva11g01379 559 Gene3D PRONE domain, subdomain 1 110 345 - -
Bva11g01379 559 Gene3D PRONE domain, subdomain 1 346 479 - -
Bva11g01379 559 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 116 472 IPR005512 GO:0005085
Bva11g01379 559 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 18 549 IPR038937 GO:0005085
Bva11g01379 559 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 18 549 - -
Bva11g01379 559 Coils Coil 392 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01379 Bva-Chr11 13757964 13764899 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01379 - - gmx:100778067 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01379 11 13757964 13764899 Bva11g01379 11 13757964 13764899 ECH