Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01370 atggcCTGCGCCAAATCTCATTCTCCTTCGCATGCTTTGTTCCTCGTAGCcatccttcttccttttttaacCTTCTGGCCCAAGAGAGCCAATGCCAGTGGCTTCACAGTTGATCTCATAGCCCGTGATTCACCTTTATCCCCATTCTACAATTCATCAAAAACGCATTGTCGTTTGCGTGATGCTTTTCGTCGTTCATTGAGTCGTGCCAATCGTTTCAACTCAGCAATATTAACTCCCACAAGCAAAATCCAGACCGAATTAATCCCAGATGGTGGAGAGTACATTATGAACATATCAATTGGGACTCCACCAATGGAGGTTCTCGCCATAGCTGATACAGGCAGTGACCTTGTATGGATACAATGTCTGCCTTGCAAAGATTGTTACAAGCAAACACTTCCTCTCTTCAATCCTGGCCGTTCATCATCACACCAAACCGTACGATGTGAATCTAGCTTCTGCAATGCACTACCATCATCTACTTGCCAACAAAACACTTGTGAGTATAGTTATTCATATGGGGATAGTTCTTATACCAATGGAGACCTTGCCACTGAAACTTTAACACTTGGTATCAATACCCCAGTTTCCTTTCCAAGAATTGTGTTTGGGTGTGGACACGACAATGGTGGCACCTTTGATAAGCAAGGTTCTGGCCTAGTGGGACTTGGTGGTGGTAAACTTTCACTTATTTCTCAGCTGGGTCAGTCCATTAGCCAAAAATTCTCCTATTGCTTAGTGCCCACGGAAGCTGGTGTCTCAGGCAAAATAAGTTTCGGTACCGACGCTATCACTTCTGGTACCGGTGCCGTCACTACTCCTTTGATCAGGAAAAATGTTGATACCTTCTATTTCCTTACGTTAGAAGCCATTAGTGTTGGGAACCAGAGAATTGCTTACAAGGGTTCATCAAAGGTGACTCCTGATGCTTACGAGGGTAATATCATAATTGATTCAGGGACAACTTTGACCCTTCTGACATCACAGTTTATTGATGATCTAATATCagctttgaagaaaaatattaaggcTACAACTGTGAAGGATCCCAAGGGTGATTATAGTCTTTGTTATAAAAAGGTTGATTTTGATCATTCTAGTTTCCCTGTCATCACTGCACATTTCAGAGGGGCTGATGTTAAGTTGCAGCCTCTAAATACGTTCGCTTTGGTGGAAGACGACGTCGTATGTTTCACAATGATTGCGTCCAGCGGTGTCTCTATATATGGAAACTTAGCTCAGGTTAACTTCAATGTAGGGTACGACCTTGAGGCTAGAACTGTTTCCTTTTTGCCAAGAGATTGCACCAAGCAAAGATA 1322 0.4168 MACAKSHSPSHALFLVAILLPFLTFWPKRANASGFTVDLIARDSPLSPFYNSSKTHCRLRDAFRRSLSRANRFNSAILTPTSKIQTELIPDGGEYIMNISIGTPPMEVLAIADTGSDLVWIQCLPCKDCYKQTLPLFNPGRSSSHQTVRCESSFCNALPSSTCQQNTCEYSYSYGDSSYTNGDLATETLTLGINTPVSFPRIVFGCGHDNGGTFDKQGSGLVGLGGGKLSLISQLGQSISQKFSYCLVPTEAGVSGKISFGTDAITSGTGAVTTPLIRKNVDTFYFLTLEAISVGNQRIAYKGSSKVTPDAYEGNIIIDSGTTLTLLTSQFIDDLISALKKNIKATTVKDPKGDYSLCYKKVDFDHSSFPVITAHFRGADVKLQPLNTFALVEDDVVCFTMIASSGVSIYGNLAQVNFNVGYDLEARTVSFLPRDCTKQR 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01370 440 Gene3D Acid Proteases 261 440 IPR021109 -
Bva11g01370 440 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 17 437 - -
Bva11g01370 440 ProSiteProfiles Peptidase family A1 domain profile. 95 432 IPR033121 -
Bva11g01370 440 Pfam Xylanase inhibitor N-terminal 95 261 IPR032861 -
Bva11g01370 440 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 316 327 IPR001969 GO:0004190|GO:0006508
Bva11g01370 440 PRINTS Pepsin (A1) aspartic protease family signature 101 121 IPR001461 GO:0004190|GO:0006508
Bva11g01370 440 PRINTS Pepsin (A1) aspartic protease family signature 316 327 IPR001461 GO:0004190|GO:0006508
Bva11g01370 440 PANTHER OS07G0603500 PROTEIN-RELATED 17 437 - -
Bva11g01370 440 Pfam Xylanase inhibitor C-terminal 285 431 IPR032799 -
Bva11g01370 440 Gene3D Acid Proteases 70 260 IPR021109 -
Bva11g01370 440 CDD pepsin_A_like_plant 94 436 IPR034161 -
Bva11g01370 440 SUPERFAMILY Acid proteases 90 437 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01370 Bva-Chr11 13722876 13724198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01370 60 438 Miscellaneous Gene Families AT1G77480 25.735 2.13e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01370 - - qsu:112006534 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01370 11 13722876 13724198 Bva11g01370 11 13722876 13724198 ECH