Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01369 atggatgCTATACGGAAGCAAGCCAGCAAATTAAGGGAACAAGTAGCAAGGCAGCAGCAGGCTATACTTCGACAGTTGGGACAAATTAGCAATGAGCCACTTATGATTGATGAATCTGAGCTTCAATGTCACCAACAAATTCAAAAGTTGTACAATTCTACAAAGACAGCAAAGCATTATCAGCGTCGTATTGTTCGTGGTGTAGAAGGTTTCATCTCCGTTAGTTCAAAGCATATGGATATAGTAAGGAAGTTAGCTAAAGACTGTTGCAAATACGAGACTGAGAATCAAAGCAGTACCTATCCCCTTGCTAGAGCTTCTCTTCACATGGGTAACTCATATGAATTAGTGGAAAACGAGAAGGAGACTTTGCTTGGCATCCTGGGTGATCAGGTGTCTGAGCCACTGAGGGCGCAAATAAGAGGTGCTCCTTTGGAAGATGCTCGTCACCTTGCTCACCGTTATGATAAACTTCGTCAAGAGTTAGAAGCTCAGGCAGCTGAACTTTTGAGGCGTCGATCAAAGTTGAAGGATTCTTCTATTTCTGCAGAGAGTTCCATGAGGCTTCAAAATGGAGAAACAAGgtttaaagagcttaattctGCATTGGGGGCACTTGGAAGAGAAGCAACTGCTGCTATGTTGGCAGTTGAAGATCAACAGCAACAAATAACTCTCCACAGCCTTTGTACAATGGTGGATGCTGAGAGAGCTTATCATCAACATGCCCTTGTTATTCTAGAGAAGCTATATGCTGAGATGATTCTGGAGAAGCAATCAAAAGAGTATTTTTCACCTCCAGTGCCCAGAGATGAATACAAGCAACATACAGATGAGAACACTAATTCAAATGGTCTTGATCATAAAAACACCAGTCATATGGATACCTTGTTTTTTGCCAAGGTCATACACCCATTTGATGCTCAAGCTGAGGGAGAGTTGAGTTTATCAATTGATGATTATGTTGTGGTTCGTCAGGTTGCTCCTAATGGATGGTCTGAAGGAGAATGCAACGGCAACGCTGGATGGTTTCCCTCTGCATATGTAGAGGATACAATACCACCAAGCAAGATAATGGAAAAAAACTCCACATCTTCAAGTCCTCATCCAtg 1112 0.4146 MDAIRKQASKLREQVARQQQAILRQLGQISNEPLMIDESELQCHQQIQKLYNSTKTAKHYQRRIVRGVEGFISVSSKHMDIVRKLAKDCCKYETENQSSTYPLARASLHMGNSYELVENEKETLLGILGDQVSEPLRAQIRGAPLEDARHLAHRYDKLRQELEAQAAELLRRRSKLKDSSISAESSMRLQNGETRFKELNSALGALGREATAAMLAVEDQQQQITLHSLCTMVDAERAYHQHALVILEKLYAEMILEKQSKEYFSPPVPRDEYKQHTDENTNSNGLDHKNTSHMDTLFFAKVIHPFDAQAEGELSLSIDDYVVVRQVAPNGWSEGECNGNAGWFPSAYVEDTIPPSKIMEKNSTSSSPHP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01369 370 SUPERFAMILY SH3-domain 298 350 IPR036028 GO:0005515
Bva11g01369 370 Coils Coil 1 21 - -
Bva11g01369 370 SUPERFAMILY BAR/IMD domain-like 42 254 IPR027267 -
Bva11g01369 370 Coils Coil 145 179 - -
Bva11g01369 370 SMART SH3_2 298 353 IPR001452 GO:0005515
Bva11g01369 370 Gene3D SH3 Domains 281 367 - -
Bva11g01369 370 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 1 1 360 - -
Bva11g01369 370 MobiDBLite consensus disorder prediction 266 289 - -
Bva11g01369 370 Gene3D Arfaptin homology (AH) domain/BAR domain 29 255 IPR027267 -
Bva11g01369 370 Pfam Variant SH3 domain 302 350 IPR001452 GO:0005515
Bva11g01369 370 ProSiteProfiles Src homology 3 (SH3) domain profile. 295 354 IPR001452 GO:0005515
Bva11g01369 370 MobiDBLite consensus disorder prediction 266 283 - -
Bva11g01369 370 PANTHER SH3 DOMAIN-CONTAINING 1 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01369 Bva-Chr11 13719844 13722832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01369 - - gmx:100816554 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01369 11 13719844 13722832 Bva11g01369 11 13719844 13722832 ECH