Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva11g01365 | atgACGCGGGGGAAGCAGAAAATCGAATCACAGAGGCGCAACGCAGAGAGGAACCAGAAGCCAAAGGGGTCGCAGCTTGAGGCCAGAGctgttggtctcaaagttaCTTGTCCAATCTGCAAGGTTCAACTTGCCAATCAAAACCAACTCGGCGATCATTATGGCTCCAAACATCCGAAGGAAAAACCTCCCGCTGAATCGAGCTA | 206 | 0.4709 | MTRGKQKIESQRRNAERNQKPKGSQLEARAVGLKVTCPICKVQLANQNQLGDHYGSKHPKEKPPAESS | 68 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva11g01365 | 68 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 37 | 58 | IPR013087 | - | |
| Bva11g01365 | 68 | SUPERFAMILY | Expressed protein At2g23090/F21P24.15 | 1 | 65 | - | - | |
| Bva11g01365 | 68 | PANTHER | GEO09665P1-RELATED | 1 | 66 | IPR045230 | - | |
| Bva11g01365 | 68 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Bva11g01365 | 68 | PANTHER | GEO09665P1-RELATED | 1 | 66 | - | - | |
| Bva11g01365 | 68 | Gene3D | - | 1 | 66 | IPR026939 | - | |
| Bva11g01365 | 68 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 35 | 63 | IPR013087 | - | |
| Bva11g01365 | 68 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Bva11g01365 | 68 | Pfam | Zinc-finger of C2H2 type | 36 | 57 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva11g01365 | Bva-Chr11 | 13700970 | 13702558 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva11g01365 | - | - | mus:103973122 | 130.568 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva11g01365 | 11 | 13700970 | 13702558 | Bva11g01365 | 11 | 13700970 | 13702558 | ECH |