Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01363 ATGCCCCAGGGACAGCCGGGTTCATTGAAAAGGAGCTTGTCAAGAAGGCGCTCGTTAAGGTCTGAGGTAGATACGGATGACAGGGGCTGGACGTCACTTCATGTTTTCTCTCGGAAAGGTGATATCAAAGTGGTAAAAAAACTTCTTGACGAGGGAACGGATGTAAATGCGGCTGCGTGGGGCCCAAAGTCAAAAGGGGTGACCCCTCTTCACCTTGCTGCTGAAGGTGGCCACATTGAAGTCATGGACGAATTGCTTGAGCGTGGTGCGAATATTGATGCCAGAATTAAGGGTGCTTGTGGCTGGACACCACTCCATGTTGCTGCCAAAGAAAGGAGGAGGAAGGCGGTGAAATTCCTGATAGAGAATGGAGCATTCTTGCCTCCTGATATCAATGATAGCCGATTTAATCCCCTCTTCATTACTGCGCGGGACTTGAATGGGCCTATGAGGAGATG 458 0.5 MPQGQPGSLKRSLSRRRSLRSEVDTDDRGWTSLHVFSRKGDIKVVKKLLDEGTDVNAAAWGPKSKGVTPLHLAAEGGHIEVMDELLERGANIDARIKGACGWTPLHVAAKERRRKAVKFLIENGAFLPPDINDSRFNPLFITARDLNGPMRR 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01363 152 SMART ANK_2a 65 94 IPR002110 GO:0005515
Bva11g01363 152 SMART ANK_2a 28 57 IPR002110 GO:0005515
Bva11g01363 152 SMART ANK_2a 100 133 IPR002110 GO:0005515
Bva11g01363 152 SUPERFAMILY Ankyrin repeat 25 140 IPR036770 -
Bva11g01363 152 ProSiteProfiles Ankyrin repeat region circular profile. 100 125 - -
Bva11g01363 152 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Bva11g01363 152 ProSiteProfiles Ankyrin repeat profile. 100 125 IPR002110 GO:0005515
Bva11g01363 152 ProSiteProfiles Ankyrin repeat region circular profile. 65 95 - -
Bva11g01363 152 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 5 139 - -
Bva11g01363 152 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
Bva11g01363 152 ProSiteProfiles Ankyrin repeat region circular profile. 28 57 - -
Bva11g01363 152 Pfam Ankyrin repeat 100 125 IPR002110 GO:0005515
Bva11g01363 152 Pfam Ankyrin repeats (3 copies) 22 95 IPR002110 GO:0005515
Bva11g01363 152 Gene3D - 1 149 IPR036770 -
Bva11g01363 152 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 5 139 - -
Bva11g01363 152 MobiDBLite consensus disorder prediction 1 21 - -
Bva11g01363 152 PRINTS Ankyrin repeat signature 66 81 IPR002110 GO:0005515
Bva11g01363 152 PRINTS Ankyrin repeat signature 116 130 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01363 Bva-Chr11 13694933 13697379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01363 26 144 Miscellaneous Gene Families AT5G02620 33.613 1.99e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01363 - - jre:109001089 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01363 11 13694933 13697379 Bva11g01363 11 13694933 13697379 ECH