Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01361 ATGGCTTGCCCACCCTTTGAATTTTCAGCCAAGTATTATAGTCATACAAATGGTAACTGTGTGAGGCAAAAGAGCTTCTTTGATGGCAAACCAGTGCTTAATCAGGGCGTTGGCTATTCTGTCATACTGGGTTTTGGTGCTTTCTTTGCTGTCTTCACCTCTTTCTTGGTATGGCTGGAGAAGAGATATGTTGGCTCCCGCCACACCTCTGAATGGTTCAATACTGCAGGAAGAAATGTTAAAACTGGACTTATTGCGAGTGTTATTGTGTCTCAGTGGACATGGGCTGCTACAATCTTGCAAAGTTCTAATGTTGCTTGGGAGTATGGGGTTAGTGGACCGTTCTGGTATGCCAGCGGGGCTACCATCCAGGTACTGTTGTTTGGAGTCATGGCCATTGAGATCAAAAGAAAAGCTCCTCATGCTCATACTGTTTGTGAAATTGTCAAAGCACGTTGGGGGACTGCGGCTCACATTGTATTCCTCATCTTCTGCTTTATGACAAATATAATTGTAACAGCCATGCTGCTTCTTGGTGGTTCTGCGGTTGTGAATGCATTAACTGGAGTGAACATTTATGCAGCTAGCTTTCTAATACCTCTTGGAGTAATTGTCTACACACTAGCTGGAGGACTAAAAGCAACATTCTTGGCAAGCTATATACATTCTGCCATAGTGCACTTGGTTTTGATGGTTTTTGTCTACCTTGTGTATACGGCAAGCAGTGAGCTTGGTAGCCCTAGCGTTATTTACAACCGTCTGGTGGAGGTTGCTAGCAAATCAAGAACATGTCAAGTGCCTACATCTCATCATGATCAATCTTGTGGTCCTGTTAGTGGGAATTACAAGGGATCTTACTTAACAATGCTGAGTTCAGGTGGCTTCGTTTTTGGGCTTATAAACATTGTGGGCAACTTTGGCACTGTTTTTGTTGACAATggATATTGGGTAAGTGCCATTGCTGCAAGACCAGCATCAACTCATAAGGGCTACTTGTTGGGTGGGTTGATCTGGTTTGCAGTGCCATTTTCTTTAGCTACATCATTGGGTCTGGGAGCCCTGGCCCTTGATCTACCAATAACGGAAAGCGAGGCAAGCCATGGACTTGTTCCCCCTGCTACTGCTGTAGCTTTAATGGGGAAAGCAGGATCCATTCTTCTTCTCACTATGCTTTTCATGGCAGTGACTTCTGCTGGCTCATCTGAACTAATTGCTGTGTCCTCATTATGCACGTATGATATCTATCGTACATACATAAATCCTAATGCAAGTGGAAAGAAAATCCTCAAAGTTTCCAGGGGTGTTATCTTAGCCTTTGGTTGTTTCATGGGATTGTTAGCTGTAATACTCAACAAAGTCGAAGTTTCTTTGGGATGGATGTACCTTGCAATGGGTGTTCTGATTGGATCAGCAGTTCTTCCCATAGCTTTTATGCTTCTATGGAGAAAAGCAAATGCAATCGGTGCCATCCTAGGAACAACAATTGGTTGTGTTTTAGGAATCATCACATGGTTGTCTGTTACAAAAATTGAGTATGGTCGGGTAAACCTCGACACAACCGTTCGAAATGCACCAATGCTTGCTGGAAATCTTGTATCTATACTGACTGGAGGAGCAATTCATGCCATCTCAAGCATGTTATGGCCTCAAAACTATGACTGGAGTACCACTAGGCAGCAGATCACAATGGTTGAGAAGGACAAGATCGATCTACCCTCAGAAGagttaaaagaagagaagttaATACGAGCAAAAGCATGGATAGTGAAGTGGGGAGTTGGTTTTACTGTTTTGATAGTCATACTATGGCctattctctctctcccaGCGGGAGAGTTTAGTAAGAGCTACTTCAATTTCTGGGCTGTGATTGCTATAGCATGGGGTACTGTTGGTTCTTCCGTGATCATTGCTTTACCATTAATGGAGAGCTGGGAAACCATTCAAGTTGTTATCATGGGCATGTTTACAAGTGACAGACTTACAGAAAAGGTTGACGAGTTAAATTTCAAGCTACATGCAATCATGCAGGCAATGCCAGAAGCAGAAAGGCTTTACTTAATTGAGAAGGAGAAGGTCAAAAGAGCAGAAGCCTTAGGACAAGCAGCCGGTTCTCTTCCTGCATA 2126 0.4262 MACPPFEFSAKYYSHTNGNCVRQKSFFDGKPVLNQGVGYSVILGFGAFFAVFTSFLVWLEKRYVGSRHTSEWFNTAGRNVKTGLIASVIVSQWTWAATILQSSNVAWEYGVSGPFWYASGATIQVLLFGVMAIEIKRKAPHAHTVCEIVKARWGTAAHIVFLIFCFMTNIIVTAMLLLGGSAVVNALTGVNIYAASFLIPLGVIVYTLAGGLKATFLASYIHSAIVHLVLMVFVYLVYTASSELGSPSVIYNRLVEVASKSRTCQVPTSHHDQSCGPVSGNYKGSYLTMLSSGGFVFGLINIVGNFGTVFVDNGYWVSAIAARPASTHKGYLLGGLIWFAVPFSLATSLGLGALALDLPITESEASHGLVPPATAVALMGKAGSILLLTMLFMAVTSAGSSELIAVSSLCTYDIYRTYINPNASGKKILKVSRGVILAFGCFMGLLAVILNKVEVSLGWMYLAMGVLIGSAVLPIAFMLLWRKANAIGAILGTTIGCVLGIITWLSVTKIEYGRVNLDTTVRNAPMLAGNLVSILTGGAIHAISSMLWPQNYDWSTTRQQITMVEKDKIDLPSEELKEEKLIRAKAWIVKWGVGFTVLIVILWPILSLPAGEFSKSYFNFWAVIAIAWGTVGSSVIIALPLMESWETIQVVIMGMFTSDRLTEKVDELNFKLHAIMQAMPEAERLYLIEKEKVKRAEALGQAAGSLPA 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01361 708 Pfam Sodium:solute symporter family 74 496 IPR001734 GO:0016020|GO:0022857|GO:0055085
Bva11g01361 708 Gene3D Sodium/glucose cotransporter 62 607 IPR038377 -
Bva11g01361 708 PANTHER - 19 684 IPR031155 GO:0015204|GO:0016021|GO:0071918
Bva11g01361 708 CDD SLC5sbd_DUR3 39 548 - -
Bva11g01361 708 PANTHER UREA ACTIVE TRANSPORTER 19 684 - -
Bva11g01361 708 ProSiteProfiles Sodium:solute symporter family profile. 38 510 IPR001734 GO:0016020|GO:0022857|GO:0055085
Bva11g01361 708 TIGRFAM sss: transporter, solute:sodium symporter (SSS) family 73 496 IPR001734 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01361 Bva-Chr11 13682205 13685700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01361 3 700 Organic Solute Cotransporters AT5G45380 77.525 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01361 K20989 - gmx:100784391 1245.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01361 11 13682205 13685700 Bva11g01361 11 13682205 13685700 ECH