Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01357 ATGGGTTTGCAGGAGGATTTCCAACAATATGCTGAGAAAGCCAAGACTTTGCCAGAGAATACCACAAATGAAAACAAGCTTATCCTCTATGGATTGTACAAGCAAGCCACCGTTGGACCTGTCAACACCAGCCGCCCTGGAGTGTTCAACATGAGGGACAGAGCCAAATGGGATGCATGGAAGGATGttgaagGGAAATCCAAGGATGAGGCAATGAGTGATTACATCACTAAGGTGAAACAGCTTCTGGAAGAAGCAGCGGCAACTGCTTG 272 0.4632 MGLQEDFQQYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGVFNMRDRAKWDAWKDVEGKSKDEAMSDYITKVKQLLEEAAATA 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01357 90 ProSitePatterns Acyl-CoA-binding (ACB) domain signature. 21 39 IPR022408 -
Bva11g01357 90 Gene3D - 1 90 IPR014352 -
Bva11g01357 90 SUPERFAMILY Acyl-CoA binding protein 3 85 IPR035984 GO:0000062
Bva11g01357 90 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 3 88 IPR000582 GO:0000062
Bva11g01357 90 Pfam Acyl CoA binding protein 4 79 IPR000582 GO:0000062
Bva11g01357 90 PANTHER BNAA08G07670D PROTEIN 1 90 - -
Bva11g01357 90 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 1 90 - -
Bva11g01357 90 PRINTS Acyl-coA-binding protein signature 4 19 IPR000582 GO:0000062
Bva11g01357 90 PRINTS Acyl-coA-binding protein signature 65 82 IPR000582 GO:0000062
Bva11g01357 90 PRINTS Acyl-coA-binding protein signature 21 39 IPR000582 GO:0000062
Bva11g01357 90 PRINTS Acyl-coA-binding protein signature 44 59 IPR000582 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01357 Bva-Chr11 13667466 13669001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01357 1 90 Acyl Lipid Metabolism Gene Families AT1G31812 70.000 1.56e-43 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01357 K08762 - mus:103982409 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01357 11 13667466 13669001 Bva11g01357 11 13667466 13669001 ECH