Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01328 ATGAATCGCCACCACGATCCCAACCCATTCGACGAAGAAGAAGTCCACGTGAATCCCTTCTCGAATGGTGCTGCTCCTGGATCAAACTCACGTGTTCCACCGGTGACATCTGAACCGCTTGGATTTGGTCAAAGGCATGATGCTACAGTGGACATTCCTTTAAATAATGCAAATGATagtaagaaaaaagagcaagagCTAGCATCTCGGGAAGCAGATTtgaaaaggagagagaaggaaatcaaaagaagagaagatgcTGTATCTAAAGCTGGTGTGCCTGTTGATGATAAGAATTGGCCTCCATTTTTCCCAATTATTCATCATGATATAGCTAATGAGATACCAGCTAATGTTCAGAAGCTTCAATATGTGGCCTTTGCAAGTTGGTTAGgAATTGTTCTCTGCCttgtttttaatgttattgCTGTGACTGTCTGTTGGATAAGAGGCGGAGgtgttaaaatttttttccttgcgGTGATATATGCTCTGCTTGGAGTTCCCCTATCATATGTGCTTTGGTACAGGCCTCTCTATCGTGCTATGAGGACAGATAGTGCATTGAAGTTTGGttggtttttcttgttttacatGCTGCATATTGCATTTTGTATATTTGCTGCCATTGCACCTCCAGTTGTCTTTCATGGAAAGTCATTAACGGGAATTCTTGCTGCAATTGATGTCTTTTCGGATCATGTTTTTGTTGGGatattttatttggttggGTTTGGCTTGTTTTGCTTAGAGGCCCTTCTAAGCTTGTGGGTTATTCAGAAAATTTACATGTATTTCAGGGGGAATAAGTG 812 0.3571 MNRHHDPNPFDEEEVHVNPFSNGAAPGSNSRVPPVTSEPLGFGQRHDATVDIPLNNANDSKKKEQELASREADLKRREKEIKRREDAVSKAGVPVDDKNWPPFFPIIHHDIANEIPANVQKLQYVAFASWLGIVLCLVFNVIAVTVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFGWFFLFYMLHIAFCIFAAIAPPVVFHGKSLTGILAAIDVFSDHVFVGIFYLVGFGLFCLEALLSLWVIQKIYMYFRGNK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01328 270 Coils Coil 60 80 - -
Bva11g01328 270 MobiDBLite consensus disorder prediction 57 78 - -
Bva11g01328 270 MobiDBLite consensus disorder prediction 1 78 - -
Bva11g01328 270 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 270 IPR007273 GO:0015031|GO:0016021
Bva11g01328 270 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 4 1 270 - -
Bva11g01328 270 Pfam SCAMP family 98 268 IPR007273 GO:0015031|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01328 Bva-Chr11 13532525 13537785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01328 1 270 Miscellaneous Gene Families AT1G32050 73.704 9.19e-152 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01328 K19995 - gmx:100806586 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01328 11 13532525 13537785 Bva11g01328 11 13532525 13537785 ECH