Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01323 ATGGCTGCTCTTCAATACTTGGAATCGCTGCGGAACGCGCATCCAGAGCTAGCCGAATGGTATAATGCGCTTGCAGATCTGTACCAGAAGAAGCTCTGGCACCAGCTAACTCTGAAGCTCGAGCAGTTCGTAGCTCTTGCTGTGTTCCagGCTGGTGATGCTCTGATACAGTTATATCACAATTTCATCAGAGACTTTGAGACTAAAATTAATCTTCTCAAGCTTGCACATTTTGCTGTGATAGTTTCTCGGCAGTATTCTGAGAAAGAAGCTGCCATTGGCTATCTTGAGGGGATCATCGAGAAGCTTCAGGCCACAAAAGAGCAGCGTATAGAAGAACCTATTCTCTACATTAAGATGCAAATAGCCATATTTAAGCTCGAGCAAGGTGACCAAAAGAAATGCAAGCAACTTCTTGAAGATGGAAAGAGTACACTCGACAGCATGACAGATATTGATCCATCTGTATATGCTAGCTATTATTGGGTATCGTCTcaatatcataaatttcaacAGGAATTTGCTGATTTCTACAAAAGTGCGCTTCTCTACCTGGCATACACATCAGTGGAGTCACTTTCAGAATCGTTCAAGCTGGATTTGGCGTTTGATCTTTCTCTGTCTGCTCTTCTGGGAGATAACATCTACAACTTTGGAGAGCTACTTGCCCATCCTATTATCAAGAGTCTTATGGGAACAAAGGTGGAATGGCTCTACTATATTCTTCAGGCATTCAATTCAGGTGATTTAGCTCGCTATCAACATTTGTGCCAGGTGCACAATGCTGCTCTAAGGGCTCAACCAGCACTAGTTCAGAATGAGAAGAGGCTGTTGGAAAAGATCAATATTCTCTGCTTGATGGAGATTATATTCAGCCGGCCTTCCGAAGATCGAACTATTCCCCTGAGTGTCATTGCTGAGCGTACAAGACTTTCTATAGAGGATGTGGAACATCTCCTTATGAAGAGCCTTTCTGTTCATCTGATTGAGGGTATAATTGATCAAGTTGAGGGTACAGTGCATGTTTCCTGGGTGCAGCCTAGAGTTCTGGGAATTCCCCAGATCAAATCCTTACGTGATCGATTGGATAATTGGTTGGGCAAAGTACACACTGCGTTGTTATCCATCGAGGCGGAAACACCCGATCTAATTGGATCGTG 1160 0.431 MAALQYLESLRNAHPELAEWYNALADLYQKKLWHQLTLKLEQFVALAVFQAGDALIQLYHNFIRDFETKINLLKLAHFAVIVSRQYSEKEAAIGYLEGIIEKLQATKEQRIEEPILYIKMQIAIFKLEQGDQKKCKQLLEDGKSTLDSMTDIDPSVYASYYWVSSQYHKFQQEFADFYKSALLYLAYTSVESLSESFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLMGTKVEWLYYILQAFNSGDLARYQHLCQVHNAALRAQPALVQNEKRLLEKINILCLMEIIFSRPSEDRTIPLSVIAERTRLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDNWLGKVHTALLSIEAETPDLIGS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01323 386 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 HOMOLOG B-LIKE 1 384 - -
Bva11g01323 386 SUPERFAMILY "Winged helix" DNA-binding domain 274 348 IPR036390 -
Bva11g01323 386 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 272 365 - -
Bva11g01323 386 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 1 384 IPR035298 -
Bva11g01323 386 SMART PINT_4 272 365 IPR000717 -
Bva11g01323 386 ProSiteProfiles PCI domain profile. 174 347 IPR000717 -
Bva11g01323 386 Pfam PCI domain 238 343 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01323 Bva-Chr11 13517552 13521003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01323 K03039 - zju:107405749 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01323 11 13517552 13521003 Bva11g01323 11 13517552 13521003 ECH