Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01322 ATGGATCAAAATGGAGAAAGCTGGAGGGAATTGGTGAGGAAGATGCTTCCCCCTGGTGCTTCTCTCCCTGACGATGCTTCTGATCTTGACTACTCCATAGCTTTGGAGTATATAGGTCCTCCTGTTCCATATCAAGTACCAAAAGTTGATCCCCTTGATGTGAATTCACGAGCAATCCCTACTGCTGAACCACTCTCTGAATCACAAAGATCAATTAGTCATGTGGGGCTTCCAGCAGTTGAACCAATCCCTCTGCCTGTATCTCGCATTGCTGCTGTAACGAGTTCTCCTAATCAAAGTCCGAGAATTTCGGCAAGTTCAGAATCTGTGGTGTCTGTTTTGCAAAATCCtgatttttcttctgcttcacCTTCAGCTTCACCTGGTTCAGTTCATAATCCTCCAAATAATCCTCCCAAGCAAGTAACTAATGAAGTAAAGAGGGCACCGGTTGTCACTTTCAATACTGTTGACAGATCTCAAAGGAAAGAAGTTGAGATGGTTAAGCCAGTTTATCCAGAATATGTCGGGGtttctaaagaaaagaaaaagaagaaaacaagagttTGTTATAGATGTGCCAAAGGGAAGTGGGAAACCAAGGAGTCTTGCCTAGTTTGTGATGCCAAGTATTGCAGCAATTGTGTGCTAAGGGCAATGGGATCAATGCCTGAAGGGCGCAAATGTGTGACTTGCATTGGTCAGCCAATTGATGAATCAAAGCGTCATAGATTGGGTAAACATTCAAGGGTATTGTCCCGACTCTTAAGTCCCTTAGAAGTTAAGCAAATTATGAAGGCAGAGAAAGAATGTTCTGCTAATCAGCTTCGGCCAGAACAGCTTGTTGTCAATGGGTTCCCTCTGAAGCCGGAAGAGATGGCTGAATTACTTGGATGCCCCTTACCTCCACGGAAGCTGAAGCCTGGTAGATATTGGTATGACAAAGAATCGGGTCTCTGGGGAAAGGAAGGGGAAAAACCAAGCAGAATCATAAGTTCAAACTTGAATTTCACTGGGAAACTTAGCTCAGATGCTAGTAATGGGAACACTGAAGTTTACGTCAATGGTCGAGAAATTACAAAGCTTGAATTGAGGGTACTGAAGCTGGCAAATGTCCAGTGTCCACGCGATACACACTTTTGGGTTTATGATGATGGTCGTTATGAGGAGGAAGGTCAAAACAACATCAGAGGAAACATTTGGGAAAAGGCATCAACAAGATTTGTTTGtactcttttctctttaccCTTCCCTCATGGACAACCTCATGGTCCAAGAGACGAGATTAGCAATTATACTACAGTTCCAACTTATCTGGAACAGAAAAAGGTCCaaaagcttcttcttcttggacTTCCAGGATCTGGAACTAGCACTCTCTTTAAGCAGGCCAAGTTTTTGTATGGGAACAGATTTAATGGAGAAGAATTGCAGGAAgtcaagttgatgattcaGAGTAACATGTACAAATATCTTAGCATTTTGCTTGATGGAAGAGAGCGCTTTGAGGAGGAGGCTatttctaaaatgaaaatgcaaggTTCTTCTTGTCAGACTGTAGAACAAGGTAGGGATGGTGAAGCAGGTGATAGTATTCAATGCATCTATTCCCTCAACCCAAGGCTGAAGCATTTCTCTGACTGGCTTCTGGATATTATAGCCACCGGGGATTTAGATGCATTCTTCCCTGCGGCCACGCGTGAGTATGCACCTTTAGTTGAAGAAGTGTGGAAGGATCCTGCAATACAagaaacatataaaagaaaagatgagcTTCACTTTCTTCCAGATGTTGCAGAGTACTTCTTAAGCCGGGCTGTTGAGATATCTAGTAATGAGTATGAACCTTCTGAAAGAGATATAGTGTATGCAGAAGGCGTTACTCAGGGAAATGGTTTGGCTTTCATAGAATTCTCACTTGATGATCGTAGCCCAATGTCCGAGACTTTTACAGGGAATCTGGAACAGCCCCCACCGCTGACCAAGTACCAACTTATAAGAGTGAATGCCAGAGGGATGAACGAGGGGTGTAAGTGGGTTGAAATGTTTGAAGATGTTCGAGCAGTGGTCTTCTGCGTTTCCCTGAGTGATTATGATCAGTTGTCAATTGCCCCAGATGGGAGTGGAAGTGGAACTCTTATTCAAAACAAGATGGTTCAAAGCAGGGAGCTATTTGAAAGCATGGTGAAGCACCCTTGCTTCAAAGATACCCCatttgtattgattttgaacAAGTATGATATCTTTGAGGACAAGATTAGCAGGGTGTCTCTAAGTGCTTGTGAGTGGTTCAACGATTTTTGCCCGGTACATGCTCATCACAACAACCAGTCACTGGCTCATCAAGCTTACTTCTACGTTGCCATGAAATTCAAGGACCTATATGGTTCACTCACGGATCGAAAGCTTTTCGTGTGGCAAACCCGGGCAAGGGACCGAGTCACCGTTGACGAGGCATTCAAGTACATAAGGGAGGTTCTCAAGTGGGATGAAGAAAAGGAGGAGAATTACTACAATGGACCTGAGGATTCGTTTTACAGTACAGACATAAGCTCATCCCCCTATGTCAGACAGGAGTA 2579 0.4137 MDQNGESWRELVRKMLPPGASLPDDASDLDYSIALEYIGPPVPYQVPKVDPLDVNSRAIPTAEPLSESQRSISHVGLPAVEPIPLPVSRIAAVTSSPNQSPRISASSESVVSVLQNPDFSSASPSASPGSVHNPPNNPPKQVTNEVKRAPVVTFNTVDRSQRKEVEMVKPVYPEYVGVSKEKKKKKTRVCYRCAKGKWETKESCLVCDAKYCSNCVLRAMGSMPEGRKCVTCIGQPIDESKRHRLGKHSRVLSRLLSPLEVKQIMKAEKECSANQLRPEQLVVNGFPLKPEEMAELLGCPLPPRKLKPGRYWYDKESGLWGKEGEKPSRIISSNLNFTGKLSSDASNGNTEVYVNGREITKLELRVLKLANVQCPRDTHFWVYDDGRYEEEGQNNIRGNIWEKASTRFVCTLFSLPFPHGQPHGPRDEISNYTTVPTYLEQKKVQKLLLLGLPGSGTSTLFKQAKFLYGNRFNGEELQEVKLMIQSNMYKYLSILLDGRERFEEEAISKMKMQGSSCQTVEQGRDGEAGDSIQCIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETYKRKDELHFLPDVAEYFLSRAVEISSNEYEPSERDIVYAEGVTQGNGLAFIEFSLDDRSPMSETFTGNLEQPPPLTKYQLIRVNARGMNEGCKWVEMFEDVRAVVFCVSLSDYDQLSIAPDGSGSGTLIQNKMVQSRELFESMVKHPCFKDTPFVLILNKYDIFEDKISRVSLSACEWFNDFCPVHAHHNNQSLAHQAYFYVAMKFKDLYGSLTDRKLFVWQTRARDRVTVDEAFKYIREVLKWDEEKEENYYNGPEDSFYSTDISSSPYVRQE 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01322 859 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 19 855 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva11g01322 859 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 3 19 855 - -
Bva11g01322 859 SMART galpha_1 433 827 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva11g01322 859 MobiDBLite consensus disorder prediction 837 859 - -
Bva11g01322 859 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 441 833 IPR027417 -
Bva11g01322 859 CDD G-alpha 458 830 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva11g01322 859 Pfam G-protein alpha subunit 441 826 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva11g01322 859 MobiDBLite consensus disorder prediction 117 147 - -
Bva11g01322 859 SUPERFAMILY Transducin (alpha subunit), insertion domain 472 624 IPR011025 GO:0007165
Bva11g01322 859 PRINTS Alpha G protein (transducin) signature 739 748 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva11g01322 859 PRINTS Alpha G protein (transducin) signature 614 636 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva11g01322 859 PRINTS Alpha G protein (transducin) signature 686 714 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva11g01322 859 PRINTS Alpha G protein (transducin) signature 446 461 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva11g01322 859 Gene3D - 641 836 IPR027417 -
Bva11g01322 859 MobiDBLite consensus disorder prediction 841 859 - -
Bva11g01322 859 Gene3D - 474 625 IPR011025 GO:0007165
Bva11g01322 859 ProSiteProfiles G-alpha domain profile. 443 838 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Bva11g01322 859 SUPERFAMILY FYVE/PHD zinc finger 159 233 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01322 Bva-Chr11 13511892 13517129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01322 - - gmx:100794534 1486.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01322 11 13511892 13517129 Bva11g01322 11 13511892 13517129 ECH