Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01315 atgagaaaaaaagCTCAAGCGGAGAGCACTGAGCAGCTGCTTCTGTCTCCACCTCTTCAACTATTGGCGGGTGCTGGGGTCCGCGGGCCACCCTTATGCGAAAAGTACATGCGCGCGCCAATCATCGAGTTCTCTATCATCTTTTCCTCTCACACactctctctttgtttattGTCTAATGGCTACAAGTTTGAGGATGACTGGTCCAAGCTCTGTGGCACACGTTATCCCACTCAGCCTTTCAAAGAGACTATGTTTATCCTCTCCTCTGCgccttcttcatcttcattctTCTCCACAAGCGACTCTAGGGTTTCATTTGCTTCTTCTGCGAAGCTTTATTCGATTTCTCTGCGATCCAGTGCGAGGAACTTTGCTTGTTATTGTTCACTGTACTCATTGAAGGTGAAAGCTATGGAAGAGCTAGTTCAGAGCAAGGATTCTTCGACAAGTATGGCTGCTTCACGGACTTTTCTTGAAGCTCGCACTGAAGAAGAGCTTCTGTCTGGAATCAGGAAGGAAGCAGAAGCAGGATCTCTTCCTTCTAATCTTGCTATAGTGATGGAAGAGTTGTACCACTCCTACAAAAATGCAGTTTTCCAAAGTGGGGATCCCAGGTTTGATGAGACTGTATTGTCAAATATGAGTGTTATGTTGGATCGTGTATACATAGATATAAAGGATCCCTTTGTCTTTGAACCATACCACAAGGCAATCCGAGAACCTTTTGACTACTACAAGTTTGGTCAAAATTGTATTCGacctttaattgatttcagAAATTCTTATGTTGGCAACGTGTCCCTTTTCTGTGAAATGGAAGAGAAACTTAAGCAGGGACACAATATTATCTTGATGTCAAATCACCAAACTGAAGCAGATCCAGCTATTATTGCATTGCTTCTTGAAACAACTGTTCCAGATATTCCTGAAAACCTGATCTATGTGGCTGGAGATAGAGTTATAACAGATCCTTTATGCAAGCCCTTCAGTATGGGCAGgAACCTTATCTGTGTCTACTCAAAAAAGCACATGTATGATGATCCAGAGCTTGtagatatgaaaagaaaagcaaatataAGAAGTTTGAAGGAAATGGCTGTGCTCTTAAGGGGTGGGTCACGGATAATCTGGATTGCCCCAAGTGGTGGTAGGGACCGACCAGATCCTTCTACAGGAGAATGGGTGCCAGCACCCTTTGATGCTTCTTCAGTGGACAATATGAAAAGACTTGCTGAACATGCTGGTCCACCGTGTCATATATATCCTTTGGCAATTGTGTGCCATGACATAATGCCCCCTCCTCCCCAGGTGGAGAAAGAAATTGGGGAAAAAAGAGTTATCTCCTTTCATGGCACTGGATTATCGGTGTCTCCAGAGATAAGCTTTTCTGAAACCACTGCTGCTTGTGAAAATTCTGAAGAGGCTAAGAAGGCATATTCGCAGACCCTGTACAGTTCTGTTACTGAGCAATATAATGTGCTAAAATCTGCCATACACGGCCAAAAAGGATTAGAAGCATCACTTCCTACTATCTCACTATCACAGCCGTGGATTTA 1559 0.4157 MRKKAQAESTEQLLLSPPLQLLAGAGVRGPPLCEKYMRAPIIEFSIIFSSHTLSLCLLSNGYKFEDDWSKLCGTRYPTQPFKETMFILSSAPSSSSFFSTSDSRVSFASSAKLYSISLRSSARNFACYCSLYSLKVKAMEELVQSKDSSTSMAASRTFLEARTEEELLSGIRKEAEAGSLPSNLAIVMEELYHSYKNAVFQSGDPRFDETVLSNMSVMLDRVYIDIKDPFVFEPYHKAIREPFDYYKFGQNCIRPLIDFRNSYVGNVSLFCEMEEKLKQGHNIILMSNHQTEADPAIIALLLETTVPDIPENLIYVAGDRVITDPLCKPFSMGRNLICVYSKKHMYDDPELVDMKRKANIRSLKEMAVLLRGGSRIIWIAPSGGRDRPDPSTGEWVPAPFDASSVDNMKRLAEHAGPPCHIYPLAIVCHDIMPPPPQVEKEIGEKRVISFHGTGLSVSPEISFSETTAACENSEEAKKAYSQTLYSSVTEQYNVLKSAIHGQKGLEASLPTISLSQPWI 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01315 519 Gene3D - 153 228 IPR038114 -
Bva11g01315 519 SMART plsc_2 283 429 IPR002123 GO:0016746
Bva11g01315 519 Pfam Acyltransferase 271 426 IPR002123 GO:0016746
Bva11g01315 519 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 141 518 IPR016222 GO:0004366|GO:0006650
Bva11g01315 519 CDD LPLAT_GPAT 260 495 - -
Bva11g01315 519 Pfam Glycerol-3-phosphate acyltransferase N-terminal 155 230 IPR023083 GO:0004366
Bva11g01315 519 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 141 518 - -
Bva11g01315 519 PIRSF G3POAT 74 519 IPR016222 GO:0004366|GO:0006650
Bva11g01315 519 Gene3D - 229 510 - -
Bva11g01315 519 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 155 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01315 Bva-Chr11 13462478 13470897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01315 99 518 Acyl Lipid Metabolism Gene Families AT1G32200 64.450 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01315 K00630 - zju:107411917 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01315 11 13462478 13470897 Bva11g01315 11 13462478 13470897 ECH